Pairwise Alignments

Query, 949 a.a., peptidase, M16 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 959 a.a., Predicted Zn-dependent peptidases from Xanthomonas campestris pv. campestris strain 8004

 Score =  426 bits (1094), Expect = e-123
 Identities = 302/950 (31%), Positives = 465/950 (48%), Gaps = 34/950 (3%)

Query: 11  ILAVAISAALAGCATETSTKLPAGVTLIENVQLTDSQVGIPYKKYQLANGLTVILHQDRS 70
           +L   +    AG     +   PA ++   N   + +   I Y ++ L NGLTV++H+D  
Sbjct: 7   LLIAGVLGVAAGTVPPAAQAAPASLSKTAN---SSAIPDIAYTRFTLPNGLTVVVHEDHK 63

Query: 71  DPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSEHVADEQHFEVVTEAGGT--LNGS 128
            P+V V + YH+GS  E AG++GFAHLFEH+MF GSE+  ++  F    E  GT  +NG+
Sbjct: 64  APVVAVSIWYHIGSGDEPAGKTGFAHLFEHLMFSGSEN--NKGSFFAPLEKVGTTDMNGT 121

Query: 129 TNTDRTNYFETVPNNQLEKMLWLESDRMGFLLPALTSEKFEVQRETVKNERAQRIDNQPY 188
           T  DRTNYFETVP   L+  LWLESDRMG LL A+  E+ + QR  V+NE+ Q  +N+PY
Sbjct: 122 TWFDRTNYFETVPTTALDTALWLESDRMGHLLGAIGQEELDTQRGVVQNEKRQG-ENRPY 180

Query: 189 GRMSERFNQAMFPVGHPYSWPVIGWPEDLNRATVDDVKHFFQRWYGPNNATLTIGGDFDE 248
           GR+ +     +FP  HPY    IG  EDL+ A++ DVK +F   YG  N TL + GD   
Sbjct: 181 GRVDQNILSNLFPANHPYQHDTIGSMEDLDAASLADVKQWFNDNYGAANTTLVLAGDITV 240

Query: 249 LQALAWVNKYFGEIPRGPEVQPEPKTLVTIDKTRYLSMEDNVHLPLIRIGFPTVYANHPD 308
            QA A   +YFG+IP G  V  +   +  +   +     D+V  P I   +        D
Sbjct: 241 AQARAKAEQYFGDIPSGKPVARQQPWVTPLAAQKRGVQHDHVSQPRIYRTWAAPQLGTDD 300

Query: 309 EAALDLLANILGGGKTSLVYKNLVKDGYAVQASVSQPCQELACQMSIYALANPQKGVTLA 368
              LDL   +LGGGKTS +Y+ LV     V   VS   Q  A    +   A+ + GV  A
Sbjct: 301 MIQLDLATTVLGGGKTSRLYQRLVYQDQLVD-DVSAAIQPFALASQMQIQADVKDGVDPA 359

Query: 369 ELEQRILASINEFEQRGVTDDDLQKVKVQFEADTIFGLQSV---KGKVSNLALNQTLFGK 425
           ++E  I   + +F   G T D+LQ+ +V + A  + GL+ V    GK   LA  Q   G 
Sbjct: 360 KVEAIIDEELKKFLAEGPTADELQRAQVAYRAGFVRGLEKVGGFGGKAVILAEGQVYRGD 419

Query: 426 PNKIASDLARYANVTKDDVMRVFKKYIKDKPMVVMSVVPQGMTALVAHPDNFIAQMLPVA 485
           P     DL R    T   V +    +   K   +++V+P G     A  D  +     VA
Sbjct: 420 PGAYKQDLQRGQAATIGSVKQAASTWF-GKGDYLLTVLPAGKDFDPAAEDKAV-----VA 473

Query: 486 QTAVEG----ELPNAK----LVSSFDRSK-MPATGAASVLKVPQIWTSKLANGIEVMGTQ 536
           +    G    +LP A       S  DRSK +P T +   L  PQ+   KL NG+EV+  +
Sbjct: 474 RGTEPGKPAPKLPAAAKYKVTASKLDRSKGVPDTASFPDLSFPQLQRGKLKNGVEVILAE 533

Query: 537 SIETPTVELVIYLNGGHRLVPVEKAGLASLTAEMLNESTQKRSSEQLSQALEVLGSTVDF 596
               P  ++ +  + G+     +K G AS +A ++NEST    S +++Q  + LG+  + 
Sbjct: 534 RHTIPVTQVELLFDAGYAADQGKKLGTASFSAALMNESTASLDSVEVAQRRQRLGAITEV 593

Query: 597 SASEYQSTIKVSALTEHLDETLAILEEKLFEPAFNEADFARVKQQQLQQIQHMQSNPSYQ 656
                  +  ++AL + L  +L +  + +  PAF  AD  R++ Q L  I   ++ P+  
Sbjct: 594 GCDLDSCSASLNALNDQLQPSLQLFSDIVRNPAFKAADIERIRGQWLAGIAQEKTQPNSL 653

Query: 657 ASAALYSLLYGNNNALGV--SDTGTLDSVAALTLADVQAFYAEQYRGANAKIITVANLPE 714
              AL  L+YG+ +  G+  + +GT  ++ +L   D+QAF++   R  N +I+   +   
Sbjct: 654 GLRALPPLMYGDKHPYGIPLTGSGTEAAIKSLNAKDLQAFHSLWLRPDNLRILVAGDTTL 713

Query: 715 TALLPKL-AGLSQWQGEASVLPP--LKSFPALKGGIIYLIDKPGAAQSVINIAKRALPYD 771
             ++P+L A    W+  A+ +P   L +  A     +YLI++P A QSVI +A    P  
Sbjct: 714 AQIIPQLDAAFGDWKAPAAPVPKKNLVNVAAQPKPRVYLINRPDAPQSVI-LAGLLAPST 772

Query: 772 ATGNYFKSYLMNYPLGGAFNSRINLNLRENKGYTYGARTNFSGTGEVGEFIASSDVRTDV 831
              +     + N   GG F SR+N+NLRENK + YGART          ++ S+ V+TD 
Sbjct: 773 KAPDNLAITVANGAFGGTFTSRLNMNLRENKRWAYGARTQLVDAQGQRPYMFSAPVQTDK 832

Query: 832 TAKAVNEFINEIKA-YQQQGMTDTELTFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLS 890
           TA++ NE   E  A    + +T  E+  ++N   +     +ET     G +  I ++   
Sbjct: 833 TAESANEIFKEATAIIGDKPLTTEEIEKIKNQRIRALPGSFETTGAVLGAIEGIVQFDRP 892

Query: 891 QDFTTEQDKIINTVTKDELNALAASELDISKMIILVVGDKAKIEADLATL 940
            ++       +  + +    A     +  + M  ++VGD  KIEA +  L
Sbjct: 893 DNYVQTLKPRLEAIDQPAAQAAIKDIIAPNAMTWVIVGDLKKIEAPVRAL 942