Pairwise Alignments

Query, 257 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 259 a.a., peroxide stress protein YaaA from Dickeya dadantii 3937

 Score =  289 bits (740), Expect = 3e-83
 Identities = 142/254 (55%), Positives = 190/254 (74%)

Query: 1   MLILVSPAKTLDFEQPPLTQIHTRPDFLAQSQELIQVCQQLTPSDIATLMKVSDSIAGLN 60
           MLI +SPAKTLD+  P  TQ +T+P+ L  S++LI+ C+QLTP+DIA+LM +SD +A LN
Sbjct: 1   MLITLSPAKTLDYTSPLPTQRYTQPELLDYSRQLIKHCKQLTPADIASLMGISDKLADLN 60

Query: 61  AARFGEWKPDYSIDNAKQAIFAFRGDVYTGFDADTLTAAQLERTQSQLRILSGLYGLLRP 120
           AARF EW P +S DNA+QA+ AF+GDVYTG  A+    A  +  Q  LRILSGLYG LRP
Sbjct: 61  AARFQEWHPAFSPDNARQALLAFKGDVYTGLAAEDFNEADFDFAQQHLRILSGLYGALRP 120

Query: 121 LDLILPYRLEMGTALTNQKGKNLYEFWGNTLTDAVNSAVAAQGDGIIINLASNEYFKAIK 180
           LDL+ PYRLEMG  L N  G +LY+FWG+T+T+ +N A+ AQ D I+INLAS+EYFK++K
Sbjct: 121 LDLMQPYRLEMGIRLKNDAGNDLYKFWGDTITETLNQALKAQNDDILINLASDEYFKSVK 180

Query: 181 PKFLNGQLITPVFKDFKNGQYKVISFFAKRARGMMARYIIDQQVSSIDGLKAFEVDGYYY 240
           P  LN +LI PVF D KNG++KVISF+AK+ARG+M+R+II  ++++ + LK F+ +GYY+
Sbjct: 181 PAKLNARLIKPVFLDEKNGKFKVISFYAKKARGLMSRFIIQNRLTTPEQLKDFDSEGYYF 240

Query: 241 SEELSKPNEPTFLR 254
               S  +E  F R
Sbjct: 241 DAADSSADELIFKR 254