Pairwise Alignments

Query, 552 a.a., DNA repair protein RecN (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., DNA replication and repair protein RecN from Kangiella aquimarina DSM 16071

 Score =  424 bits (1089), Expect = e-123
 Identities = 232/555 (41%), Positives = 340/555 (61%), Gaps = 8/555 (1%)

Query: 1   MLCQLSINNFAIVRFLELDFSPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60
           ML  + I +FAI+  L+LD   GMT ITGETGAGKSI +DAL   LG RAD+  VR GA 
Sbjct: 1   MLTSIHIKDFAIIDQLDLDLKSGMTVITGETGAGKSIMVDALSYALGERADSGVVRNGAK 60

Query: 61  KTEVSARFSLHDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL 120
           + E+SA F +  +P  K WLE+  L+ DD CILRR I  DGRS+A++NG PV L Q+  L
Sbjct: 61  RAEISAYFDIQQLPHVKDWLEEQMLDDDDHCILRRVINHDGRSKAFVNGQPVNLAQVSEL 120

Query: 121 GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVTASYQRCKQIEAELKQLEASQ 180
           G  LV IHGQH H ++ KS+  L LLD YA        +     +   I  +LK  + + 
Sbjct: 121 GDFLVDIHGQHEHQSLFKSQVHLQLLDRYAGLTEQSAELAKVASKISSISGKLKAFQTAL 180

Query: 181 HERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLYLLTDGEES 240
            ++  RK L+ +Q++EL++    + +  +IE EHKR AN + L++  Q SL  L++ +E 
Sbjct: 181 KDKNDRKDLISFQLQELEQ--APIDKAADIELEHKRAANASRLLEKGQQSLSALSE-DED 237

Query: 241 NIESLLNKVVSLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAYFAY 300
           N+ S L ++V    ++ + D  L N   +L  AL+++ E++ EL+ YL  L++DP  +  
Sbjct: 238 NLSSNLGRIVHQISDMLAVDEGLKNTHDLLQSALVEIDEASHELRDYLESLDIDPQAYHE 297

Query: 301 LEERLSKAMQLARKHHVSPDKLAEHHLALKAELTTLDDDETKLEEIQLQVEASKSAYLAN 360
           L+++++    LARKH VS ++L +   AL+ EL  L+ DE   ++++ ++   +  Y   
Sbjct: 298 LDQQIAALHDLARKHQVSMEELPQTLQALQQELEELEGDEQTFDDLEKELNKLEKHYQEL 357

Query: 361 AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIMS---VNGSDNIEFMVT 417
           A+ LS  R   AK+L++ V + + +L +  G F  EV FN +  S     G +  EFMV+
Sbjct: 358 AKTLSSKRQAAAKKLNQEVVKLMQQLGLGNGVF--EVAFNQQDASSFKSTGLETAEFMVS 415

Query: 418 TNPGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRML 477
           TNPGQ   P+ +VASGGELSRI L +QVI A+    PTLIFDEVDVGI G TA +VG++L
Sbjct: 416 TNPGQKPMPLRKVASGGELSRISLALQVINAQTTQLPTLIFDEVDVGIGGGTAEIVGKLL 475

Query: 478 RSLGESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDKEQRIQELARLLGGD 537
             LG+  Q+LCVTH  QVA  GH H+ V+K     +T+T +  + + QRI+E+AR++GG 
Sbjct: 476 AELGKKAQILCVTHQAQVAAQGHHHLQVSKSQDKKATQTQLLEISETQRIEEIARMIGGI 535

Query: 538 TITSNTLANARELLQ 552
            IT     +A+ELL+
Sbjct: 536 EITDTIRQHAKELLK 550