Pairwise Alignments

Query, 260 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 3   VLIGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASINC 62
           +L+ G KGG+GK+  A+N+AV      G  V ++D D QRT S W++ R +   L SI  
Sbjct: 4   LLVLGPKGGAGKTTTARNMAVAAVLS-GLRVAVLDADRQRTLSKWLERRPDT--LPSIQS 60

Query: 63  VQLYGKIRNDLLSLEQHYDFVIVD--CGGQDNL-ALRATMSVASHILMPLRPKRRDLKTV 119
            ++  +  +      +  D +IVD     +D+  AL+  +  A  IL+P   +  +    
Sbjct: 61  FEVPMRDIDSAPEPIEDVDLLIVDTPASVEDHPGALKVLIETADLILLPSGVRGEE---- 116

Query: 120 SHMDDIVATCKMINP 134
             MD +  T K + P
Sbjct: 117 --MDSLKDTLKAVRP 129