Pairwise Alignments

Query, 453 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 554 a.a., Sensor histidine kinase TmoS from Azospirillum sp. SherDot2

 Score =  144 bits (362), Expect = 9e-39
 Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 18/277 (6%)

Query: 193 ETALSDLRSTQHHLIENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHCLDEVALLKAAFE 252
           E AL+DL   Q  LI  EKMA +  L+A VAHE+NTP+GIA+T+ TH       +   F 
Sbjct: 274 EQALADLERMQSDLIRAEKMAVIAQLIAAVAHEINTPVGIALTAATHLQTASEGIIMTFN 333

Query: 253 QNELDEDKFLTFINTMQDGLGLIERNLTRAAELVHNFKRTAADQSVLERERFNLKAYLFQ 312
             +L +  F  ++ T  +   L+  N+ RAA L+ + K     ++   R R  L+ YL  
Sbjct: 334 GGQLRKSDFQDYVGTASEVSTLLVANIERAAALIQSLKLVTEGKASSPRSRVGLRDYLSD 393

Query: 313 IFSSLRPLMRKKNIALTVELDEQIFIESYPGAIAQIFTNLVANSFRHGF----------- 361
           I  +++         L +E  + + +++YPGA+ ++   L+ N+F H F           
Sbjct: 394 IVLAVQVQPAAAGHELVLECPDGLALDTYPGALTEVLLALLTNAFAHAFEAAPAPVGFGI 453

Query: 362 ------PEHFTGDKKITIRVEKQG-SNICMQYQDNGVGMTDEVKIKAFEPFFTTARKDGG 414
                  +      ++T+ V   G   + ++  DNG G+  +++ + F+PF TT R  G 
Sbjct: 454 SESDQPEDSIRRPGQVTVSVRMMGDERVELRVSDNGRGIPADIQPRLFQPFTTTRRGAGS 513

Query: 415 TGLGMSIIYNLVTQKLHGSILLTSQPNQGVTIDIQLP 451
            GLG+  ++NLVT KL G I + S+  +G  + ++LP
Sbjct: 514 MGLGLYAVFNLVTGKLGGEIDIDSEVGRGTCVILRLP 550