Pairwise Alignments

Query, 354 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., beta-ketoacyl-ACP synthase III from Escherichia coli ECRC100

 Score =  207 bits (526), Expect = 4e-58
 Identities = 118/321 (36%), Positives = 185/321 (57%), Gaps = 8/321 (2%)

Query: 3   YATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVN--TSELASVAAKR 60
           Y  I G G  +P    TN DL   ++TSDEWI +RTGI +RHI+  N   S +   AA R
Sbjct: 2   YTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATR 61

Query: 61  ALAAAGIEGSEIDMIILASASPDTLIPNIASTVQANIGAN-CAAFDINAACSGFLYGLGL 119
           A+  AGIE  +I +I++A+ S     P+ A  +Q+ +G   C AFD+ AAC+GF Y L +
Sbjct: 62  AIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSV 121

Query: 120 ASSQIKSGQCKKVLVVGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDIPGGVLGYELN 179
           A   +KSG  K  LVVG++ L+   D + R T ++FGDGAGA V+ A++ PG ++   L+
Sbjct: 122 ADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPG-IISTHLH 180

Query: 180 NDPDGRDILKAGFGTAMDRFSADSLDFYIQFDGQEIFKRAINGMNKLSTQVLEKCGVDKD 239
            D    ++L        DR + ++   ++   G E+FK A+  +  +  + L    +D+ 
Sbjct: 181 ADGSYGELLTL---PNADRVNPEN-SIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRS 236

Query: 240 EVDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEKGLIKPN 299
           ++D ++PHQAN RII     ++ +  +   V +  +GNTSAA++P A+ +A+  G IKP 
Sbjct: 237 QLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPG 296

Query: 300 QTILSCAFGAGLTSAALLLQW 320
           Q +L  AFG G T  + L+++
Sbjct: 297 QLVLLEAFGGGFTWGSALVRF 317