Pairwise Alignments

Query, 334 a.a., Holliday junction DNA helicase RuvB (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Shewanella amazonensis SB2B

 Score =  583 bits (1504), Expect = e-171
 Identities = 298/334 (89%), Positives = 317/334 (94%)

Query: 1   MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI 60
           MIEADRLIQPQ  GQ+DVIDRAMRPKLLDEYTGQDDTRAQLKVFI+AAK R EALDHMLI
Sbjct: 1   MIEADRLIQPQDLGQEDVIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAKKRGEALDHMLI 60

Query: 61  YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP 120
           YGPPGLGKTTLA IVANEMGVNIKSTSGPVLEKAGDLAALLTNLE GDVLFIDEIHRLSP
Sbjct: 61  YGPPGLGKTTLANIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP 120

Query: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR 180
           VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAG+LTSPLRARFGIPLR
Sbjct: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRARFGIPLR 180

Query: 181 LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVQHDG 240
           LEFYNV+DLS+IV RSA+VM + +D  GA EIA+RSRGTPRIANRLLRRVRD+AEV+HDG
Sbjct: 181 LEFYNVRDLSSIVARSAKVMDVPMDEGGAEEIARRSRGTPRIANRLLRRVRDFAEVKHDG 240

Query: 241 AVTQNVAELALNLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV 300
           A+++ VA+ AL+LLDVD EGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
Sbjct: 241 AISRAVAQSALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV 300

Query: 301 LEPFLIQQGFIQRTPRGRIATARAYVHFGMIKPE 334
           LEPFLIQQGF+QRTPRGRIATARAY HF +IKP+
Sbjct: 301 LEPFLIQQGFVQRTPRGRIATARAYSHFDLIKPD 334