Pairwise Alignments

Query, 334 a.a., Holliday junction DNA helicase RuvB (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  486 bits (1250), Expect = e-142
 Identities = 245/333 (73%), Positives = 287/333 (86%)

Query: 1   MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI 60
           MIEADRLI    + +++V DRA+RP  LDEY GQ   R Q+ +FIQAA+ R E+LDH LI
Sbjct: 1   MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLI 60

Query: 61  YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP 120
           +GPPGLGKTTLA I+A+EMGV++KSTSGP+LE+ GDLAA+LTNLE  DVLFIDEIHRLSP
Sbjct: 61  FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP 120

Query: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR 180
           VVEE+LYPAMED+QLDIMIGEGPAARSIKLDLPPFTLVGATTRAG LT+PLR RFGI  R
Sbjct: 121 VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR 180

Query: 181 LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVQHDG 240
           LEFYN KDLSTIV+RSA ++GLAI+ +GA EIA+R+RGTPRIANRLLRRVRDYAEV+  G
Sbjct: 181 LEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG 240

Query: 241 AVTQNVAELALNLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV 300
            +T+ VA++ALNLLDVD  GFD+ DR+LLL +I+KF GGPVG+DNLAAAI EER TIEDV
Sbjct: 241 QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV 300

Query: 301 LEPFLIQQGFIQRTPRGRIATARAYVHFGMIKP 333
           LEP+LIQQG+I RTPRGR+ T  AY+HFG+  P
Sbjct: 301 LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIP 333