Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., response regulator in two-component regulatory system with PhoR from Escherichia coli BL21

 Score =  120 bits (301), Expect = 2e-32
 Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 8/230 (3%)

Query: 2   KRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDG 61
           +RI +VEDEA IRE    VL+Q+G+      D  SA+   N   PDL ++D  L      
Sbjct: 3   RRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGI 62

Query: 62  GFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRR 121
            F+      +M+  +P++ LTAR  + D V GL  GADDY++K  S   L AR+ A+ RR
Sbjct: 63  QFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122

Query: 122 SELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHE 181
                S    E ++E   L++D    +V   +  +E+  TEF ++H    HP  V SR +
Sbjct: 123 ----ISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQ 178

Query: 182 LMQE---AKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDS 228
           L+       ++V+D T+  H++R+RK       +   + TV G GYR+ +
Sbjct: 179 LLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHD-RMVQTVRGTGYRFST 227