Pairwise Alignments

Query, 339 a.a., hydrogenase expression/formation protein HypE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 336 a.a., hydrogenase expression/formation protein HypE (RefSeq) from Shewanella loihica PV-4

 Score =  536 bits (1380), Expect = e-157
 Identities = 262/336 (77%), Positives = 294/336 (87%)

Query: 4   VSTKEKAIQLSHGGGGKEMNKLIRELFFTEFDNPILRSEEDAAKLELQGATAFTTDSFTV 63
           ++  EK +QLSHGGGGKEMN+LI+ +FF  F+NPIL SEEDAA L  +G  AFTTDSFTV
Sbjct: 1   MADNEKTVQLSHGGGGKEMNRLIKSIFFKAFNNPILASEEDAALLHFEGQAAFTTDSFTV 60

Query: 64  SPLFFAGGDIGKLAVAGTVNDLAMMGAEPQYLSCSVIIEEGFSLKDLTTIVRSMAKELKQ 123
           SPLFFAGG+IGKLA+AGTVNDLAMMGAEPQYLSCS IIEEGF++KDL  IV SMA+EL +
Sbjct: 61  SPLFFAGGNIGKLAIAGTVNDLAMMGAEPQYLSCSFIIEEGFAIKDLKAIVGSMAEELHK 120

Query: 124 SGARIVCGDTKVVPKGCADGLFINTSGVGRILRPNISAANVAPGDAIIVSRDVGCHGAAI 183
           SG RIVCGDTKVVPKGCADGLFINTSGVGR+L+P IS  N+ PGDAI+VS D+G HGAAI
Sbjct: 121 SGTRIVCGDTKVVPKGCADGLFINTSGVGRVLKPQISVKNLRPGDAILVSGDIGRHGAAI 180

Query: 184 LMAREGLSLESELQSDCATLWPVVEQLIAANIPLHAMRDATRGGLSAVLNEWAVAANVGI 243
           LMAREGL+LESEL SDCA LWPVVEQLIA NI +HAMRDATRGGL+AVLNEWA A+NVGI
Sbjct: 181 LMAREGLTLESELVSDCANLWPVVEQLIACNIEVHAMRDATRGGLAAVLNEWAGASNVGI 240

Query: 244 TVNEASIPVCDEVKGLCELYGFEPMDLANEGTFILAVPNDIALGALEIMQRFGHCESAAI 303
            V E+ IPVCDEVKGLCELYGFEP DLANEGTFILAVP +IA GALEI+QR+GHC+ AAI
Sbjct: 241 NVEESKIPVCDEVKGLCELYGFEPHDLANEGTFILAVPGEIADGALEIIQRYGHCQQAAI 300

Query: 304 IGTVNDELPGKVILRTPWNTKRYLDLPQGELLPRIC 339
           IG V +  PGKV+L+TPW + RYLDLPQGELLPRIC
Sbjct: 301 IGHVEETHPGKVVLKTPWGSSRYLDLPQGELLPRIC 336