Pairwise Alignments

Query, 183 a.a., integrase from Klebsiella michiganensis M5al

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 5/181 (2%)

Query: 6   KHLTIGEVQRLVEAARRGANPE-RDVCLLWMCFNHGCRVSEIRHWKLSDIDIQSGVIYIR 64
           K L+  +V+RL++A       E RD  +L + +  G RVSE+    +SDI ++ GV+ + 
Sbjct: 111 KDLSEAQVERLLQAPLVEQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVI 170

Query: 65  RLKNGFSTTHPIYKQEVKVLNEWLRVRNNYPGNN--SGWLFLSRNGQPLSRQRIYQMMKN 122
             K       P+ ++ V  +  +L     +  N   S  LF S+  Q ++RQ  +  +K+
Sbjct: 171 G-KGNKERLVPLGEEAVLWVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKH 229

Query: 123 LSLVAQLEINA-HPHMLRHACGFALANNGVDTRLIQDFLGHRNIQHTVIYTASNDARFRE 181
            +++A ++     PH+LRHA    L N+G D R++Q  LGH ++  T IYT     R R+
Sbjct: 230 YAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQ 289

Query: 182 V 182
           +
Sbjct: 290 L 290