Pairwise Alignments

Query, 455 a.a., DNA repair protein RadA from Sphingomonas koreensis DSMZ 15582

Subject, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

 Score =  425 bits (1092), Expect = e-123
 Identities = 233/463 (50%), Positives = 298/463 (64%), Gaps = 19/463 (4%)

Query: 1   MAKLQKRYVCQQCGSVSSKWAGQCADCGDWNTLVEDAGAVVTPFQAKH-------NLQGG 53
           MAK +  +VC +CG  S KW G+C  CG WNTL+E A        A +       +L G 
Sbjct: 1   MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQAAGAAGGGPANNRFGTQFASLAGA 60

Query: 54  GRMISMSGLD-TDVPLPDRMPTGIAELDRALGGGFVEASATLIGGDPGIGKSTLLLQAAA 112
             + ++S ++ TDV    R PTG+ ELDR LGGG V    TLIGGDPGIGKSTLLLQA  
Sbjct: 61  SELATLSEIEATDVA---RTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVD 117

Query: 113 KMALAGHGVAYVSGEEAADQVRLRARRLGLGNAPVQLAAATSVRDILTTLGGTAPPRLLI 172
            +  AG    YV+GEE+  QV LR++RLGL ++ VQ+ A   +  I+ TL  T P  + +
Sbjct: 118 ALQRAGQNALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPA-IAV 176

Query: 173 IDSIQTMHSDLIEGAPGTVSQVRASAQELIRFAKERGTAVVLVGHVTKDGSLAGPRVLEH 232
           IDSIQT++SD +  APG+V+QVR  A  L RFAK  GTAVVLVGHVTK+G+LAGPRVLEH
Sbjct: 177 IDSIQTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEH 236

Query: 233 MVDTVLAFEGERSHQYRILRAVKNRFGGTDEIGVFSMQSEGLAEVGNPSSLFLTSRDESV 292
           MVDTVL FEG+    +R++RA+KNRFG  +EIGVF+M   GL  V NPS++FL+   E V
Sbjct: 237 MVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPV 296

Query: 293 TGTVVFPALEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFS 352
            G+VV   LEGTRP+LVEIQALV     G +PRR  VG D  RLAM+LAVL    G++  
Sbjct: 297 PGSVVLVTLEGTRPMLVEIQALVDN--GGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACM 354

Query: 353 TSEVYLNIAGGYRVQDPAADLAVAAALVSALSERPVAPDAVVFGEIALSGEVRPVAHGAL 412
             +V++N  GG R+ +PAADLAV  A+ S+L  +P+    + FGE+ L+GEVRP   G  
Sbjct: 355 DQDVFVNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQE 414

Query: 413 RLKEAGKLGFTRALVPAAQGKEGAVALTGFKSLGGFVEHMLGR 455
           RL+EA KLGF+ A+VP A          G K + G   H + R
Sbjct: 415 RLREAAKLGFSVAVVPKANAPR-----KGTKEIEGLTIHAVDR 452