Pairwise Alignments

Query, 429 a.a., uracil transporter (NCBI) from Escherichia coli BW25113

Subject, 442 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  275 bits (702), Expect = 3e-78
 Identities = 157/428 (36%), Positives = 246/428 (57%), Gaps = 26/428 (6%)

Query: 6   IGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKI 65
           +   ER P  QT  + +QH  AMFGATVL+P+L  ++P   +L +GIGTLL+ FI  G++
Sbjct: 21  VAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRV 80

Query: 66  PAYLGSSFAFISPVLLLLPLGYE-------VALGGFIMCGVLFCLVSFIVKKAGTGWLDV 118
           P+YLGSS AF+  V+       +       +ALGG I CG+++ ++  +V K GT W++ 
Sbjct: 81  PSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIER 140

Query: 119 LFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRG 178
           L PP   GA+V  IGL LA +A     +        DS   ++++  + +    +V  RG
Sbjct: 141 LMPPVVTGAVVMAIGLNLAPIA-----VKSVSASAFDSWMAVMTVLCIGLV---AVFTRG 192

Query: 179 FLAIIPILIGVLVGYALSFAMG-------IVDTTPIINAHWFALPTLYTPRFEWFAILTI 231
            +  + IL+G++V   L   M         VD T + +A WF LP   TP F   A++ I
Sbjct: 193 MIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLI 252

Query: 232 LPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGEN 291
            P A++++AE++GHL   A +  +++  DP + R+   +GL+T++SG  G +  TTY EN
Sbjct: 253 APVAVILVAENLGHLKAVAGMTGRNM--DPYMGRAFVGDGLATMLSGSVGGSGVTTYAEN 310

Query: 292 IGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIR 351
           IGVMA+T+VYST V   AA+ A+LL    K  A I  IP  V+GG S++++G+I  +G R
Sbjct: 311 IGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGAR 370

Query: 352 VLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIF--KLI 409
           + ++++VD ++  NLI+ +V L++G     + +G   L G+  AT   I L+ +   KL+
Sbjct: 371 IWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLV 430

Query: 410 SVLRPEEV 417
            V  PE V
Sbjct: 431 DVPPPEVV 438