Pairwise Alignments

Query, 1040 a.a., multidrug efflux system, subunit B (NCBI) from Escherichia coli BW25113

Subject, 1037 a.a., acriflavine resistance protein B from Pseudomonas fluorescens FW300-N2C3

 Score =  958 bits (2477), Expect = 0.0
 Identities = 499/1018 (49%), Positives = 700/1018 (68%), Gaps = 7/1018 (0%)

Query: 10   GGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMT 69
            G  S   I  P+AT LL  A++L G+I +  LPV+ LPE ++PTIQV    PGASP+ M 
Sbjct: 5    GSVSAWCIDHPIATVLLTFALVLLGVIAFPRLPVAPLPEAEFPTIQVNAQLPGASPETMA 64

Query: 70   SAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLP 129
            S+V  PLE QF  + G+ QM+S S+ G++ + LQF L   +D A QEVQAAIN A   LP
Sbjct: 65   SSVATPLEVQFSAIPGITQMTSSSALGSTNLILQFSLDKSIDTAAQEVQAAINTAAGKLP 124

Query: 130  SDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISGVGLVTLSGG 189
            +D+PN P + KVNPAD P++ L+++ST MP T++ D VET ++++ISQI GVG + ++G 
Sbjct: 125  NDMPNLPTWRKVNPADSPVLILSISSTLMPGTELSDYVETLLSRQISQIDGVGQIYITGQ 184

Query: 190  QRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSANDQMQSAEE 249
            QRPA+RV+ +A  +AA+GLT   +R A+  A++N AKG+L G S   TLS NDQ+    E
Sbjct: 185  QRPAIRVQASADRLAAIGLTLADIRLALQQASLNLAKGALYGESSISTLSTNDQLFKPAE 244

Query: 250  YRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGANIISTADSI 309
            Y +LI++Y++GAP+ L D+A V  G+EN+++ AW++ E  + + + RQPGANI+ T D I
Sbjct: 245  YGELIVSYRDGAPVHLKDIAKVVNGSENAYVQAWSDNEPGVNLVIFRQPGANIVETVDRI 304

Query: 310  RQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATI 369
            +  LP L   LP +V+V VL DRT  IRAS+ + +  L++A+ LVV ++ LFLR + AT+
Sbjct: 305  QAALPTLQAMLPAAVQVKVLIDRTQTIRASLHEVEITLLIAVLLVVAVMALFLRQLSATL 364

Query: 370  IPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKP 429
            I    + +SL  +FA+M  + FS+NNLTL+A+ I+ GFVVDDAIVV+ENI R++E G+  
Sbjct: 365  IVSAVLGVSLTASFALMYVMGFSLNNLTLVAIVISVGFVVDDAIVVVENIHRHLEAGDGM 424

Query: 430  LAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLT 489
              AA+KGAGEIGFT++S++FSLIA  IPLLFMG +VGRLF+EFA+T    ILIS VVSLT
Sbjct: 425  REAAIKGAGEIGFTVVSISFSLIAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLT 484

Query: 490  LTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLL 549
            L P + A       +R     +       +R++  Y RGL K L H  L + V   TL +
Sbjct: 485  LAPTLAALF-----MRAPVHHAHGEAGFGERLLGGYERGLRKALAHQKLMIGVFGLTLAM 539

Query: 550  SVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFV 609
            +V+ +VFIPKGFFPVQD G++ GT +A    SF +M  + + +AD++  DPAVQ+ +  V
Sbjct: 540  AVVGYVFIPKGFFPVQDTGLVLGTSEAAADVSFPDMVAKHKALADIVAADPAVQTFSHSV 599

Query: 610  GVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQ 669
            GV G N ++ + R  I LKP  ERD      I R++  + K+PGV L+L+  QD+ + + 
Sbjct: 600  GVSGNNQTIANGRFWIALKPRGERDVSASGFIDRIRPQLLKIPGVVLYLRAGQDINLSSG 659

Query: 670  VSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASR 729
             SR QYQ+ L++    +L+ W  +L +KL+  P   D+S+D Q  G + ++N+DR +A+R
Sbjct: 660  PSRAQYQYVLKSNDGPSLNAWTQKLTDKLRGNPAFRDISNDLQLGGSITHINIDRSAAAR 719

Query: 730  LGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSS-DGG 788
             G++  DVD ALY+AFGQR I+   T+ NQY V+LE +T       +L    L S   G 
Sbjct: 720  FGLTATDVDQALYDAFGQRQINEFQTETNQYNVILELDTAQRGKAESLAYFYLRSPLSGE 779

Query: 789  VVPLSSIAKIE-QRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVD 847
            +VPLS++A+ +     PLSI H   FP   +SFN+    +LGDAV+ +   +  + +P  
Sbjct: 780  MVPLSALARFDAPSNGPLSIAHDGMFPAANLSFNLAPGVALGDAVRLLDQAKNEIGMPAA 839

Query: 848  ITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALL 907
            IT  FQG+  AFQS+L S  WLI+AA+VA+YI+LG+LYESF+HP+TI+STLP+AG+GAL+
Sbjct: 840  ITGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALI 899

Query: 908  ALLIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQACLLRFRP 967
             L + G +  ++A+IG++LLIGIVKKN I+MIDFAL A+R +G++P+EAI+QACL RFRP
Sbjct: 900  MLWLLGQDFSIMALIGLVLLIGIVKKNGILMIDFALDAQRNKGLAPQEAIFQACLTRFRP 959

Query: 968  ILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRL 1025
            I+MTTLAALLGALPLML  G GAELR+PLGI +VGGL+VSQ LTLFTTPVIYL  +R+
Sbjct: 960  IMMTTLAALLGALPLMLGYGPGAELRQPLGIAVVGGLLVSQALTLFTTPVIYLWLERV 1017