Pairwise Alignments

Query, 334 a.a., flagellar motor switch protein M (NCBI) from Escherichia coli BW25113

Subject, 322 a.a., Flagellar motor switch protein FliM from Pseudomonas lactucae CFBP13502

 Score =  243 bits (619), Expect = 6e-69
 Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 7/320 (2%)

Query: 5   ILSQAEIDALLNG--DSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINERFA 62
           +LSQ EIDALL+G  D  V+ E  A       ++ YD  +Q R+VR R+  LE+INERFA
Sbjct: 6   LLSQDEIDALLHGVDDGLVQTEMAAD---PGSVKSYDLTSQDRIVRGRMPTLEMINERFA 62

Query: 63  RHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSPSL 122
           R+ R+ +FN+LRRS D+ VG +++  + E+  +L VPT+LNL+ +KPLRGT L +    L
Sbjct: 63  RYTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKL 122

Query: 123 VFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYVRS 182
           VF  VDN FGGDGR   K+EGREFT TE RV+  +L+ A     +AW+AI  +  EY+ S
Sbjct: 123 VFKLVDNFFGGDGRH-AKIEGREFTPTELRVVRMVLEQAFIDLKEAWQAIMEVNFEYINS 181

Query: 183 EMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSRNE 242
           E+     NI   P++ +V + FH+E+    G+ ++ +P+SMIEP+RE+L      +  ++
Sbjct: 182 EVNPAMANI-VGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ 240

Query: 243 DQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLNPGDVLPIEKPDRIIAHVDGVPVL 302
           D+ W   L   +    + L A  A   LRL  IL + PGDV+P+E P  +I   +GVP  
Sbjct: 241 DERWVKALREDLLDVDVPLSATVARRQLRLRDILHMQPGDVIPVELPQEMIMRANGVPSF 300

Query: 303 TSQYGTLNGQYALRIEHLIN 322
             + G+  G  AL++   IN
Sbjct: 301 KVKLGSHKGNLALQVIEPIN 320