Pairwise Alignments

Query, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) from Escherichia coli BW25113

Subject, 697 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  300 bits (769), Expect = 1e-85
 Identities = 227/697 (32%), Positives = 335/697 (48%), Gaps = 92/697 (13%)

Query: 12  FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71
           F DEA ELL DME   L L+    D   +  +FR  H++KG    FG++      H +E+
Sbjct: 11  FGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKGSGAMFGYTEAARVAHALED 70

Query: 72  LLDEARRGEMQLNTDIINLFLETKDIMQEQLD---------------------AYKQSQE 110
           + D  R G + L ++++ L LE KD +Q  L+                     A  +  E
Sbjct: 71  VFDRVRHGRLPLTSELLGLCLEAKDHLQTLLEGDPADVPVAVREASDALMLRIAAFEHDE 130

Query: 111 PD---------AASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR 161
            D         A  +D        ++ +A GE    +     V  +   D   R   P R
Sbjct: 131 ADVDDGQAVHAAKPYDTGVPEHMTISGDATGEAEVCLW----VRLTPADDWMWRGLDPLR 186

Query: 162 IILSRLKAGEVDLL----EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE 217
           ++ S    G  +++    +  L H+  +   V+    L+  +  D+   D   +L     
Sbjct: 187 LLDSFRGYGPFEVVPVFADGGLEHVGEVPFPVRWEGVLTGRVSADVLRQDYAWLL----- 241

Query: 218 ADQITFETVEVSPKISTPPVLKLAAEQAPTGRV-------------EREKTTRSNE---- 260
            D      + +  +   PPV  L +  A  GRV             ERE      +    
Sbjct: 242 -DSENLSIMSLGKRSDCPPVRALLSA-AVGGRVNDPLALMAAARAMEREDICNCMDVQSV 299

Query: 261 -----------STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ 309
                      S+SIRV   K+D+L+  VGELVI QS L+Q    +      D +  + +
Sbjct: 300 ASEVAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLVRGVPD----DAMREVAE 355

Query: 310 -LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368
            L+R A  L++S MS+RM+PM   F  + RLVRDLA +LGK+V     G  TELDK+LI+
Sbjct: 356 GLERLAGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTELDKTLID 415

Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428
           ++ DPL HL+RN++DHGIE PE RLA GK   G + L A H GG + I V+DDGAG++ E
Sbjct: 416 QLRDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDGAGVDLE 475

Query: 429 RILAKAASQGLTVSENMSDDEVAM-LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487
           ++  +A + GL   E   D    + L++ PGF+TA  V+++SGRGVGMDVV   I  + G
Sbjct: 476 KVRLRAVAMGLIPPETEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVHSAIAALRG 535

Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547
            +++++  G GTT  I LPLTLAI+DGM V V  + +I+PL  V       EA L     
Sbjct: 536 SLDMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMV-------EACLERFVD 588

Query: 548 GE----RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603
           G       +E RG  +P V L  +  V G +    +  V++    G      VD ++G  
Sbjct: 589 GAVRTVECIEYRGRLIPCVSLRLLLGVPGEQPGYER--VIVAGKEGHEVGFAVDAVVGLQ 646

Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640
           Q V+K + +  R V  IS  T+  DG ++LI+DV  L
Sbjct: 647 QAVIKGVGNLCRNVAWISGTTVDADGGISLILDVVQL 683