Pairwise Alignments

Query, 375 a.a., 23S rRNA m(5)U747-methyltransferase (NCBI) from Escherichia coli BW25113

Subject, 449 a.a., 23S rRNA 5-methyluridine methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 7/176 (3%)

Query: 201 VPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTG 260
           V L   P +F Q N  +   + A A +W+   P + + DLFCG+G F L  A    ++ G
Sbjct: 271 VSLTFTPGNFVQVNAQINKTMVAQALEWLAPQPGERILDLFCGMGNFSLPLAKLGAEVIG 330

Query: 261 IEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQ---GDVPELVLVNPPRRGIGKPL 317
           +E   E ++ A+++AA  GL+ L F   D +   + +   G + +L L++P R G  + L
Sbjct: 331 VEGVPEMVSQARENAAANGLSNLTFYHGDLSADLSCEPWMGKIDKL-LLDPARAGAFESL 389

Query: 318 CDYLSTMAPRFIIYSSCNAQTMAKDIREL--PGFRIERVQLFDMFPHTAHYEVLTL 371
             +L  M PR ++Y SCN  ++A+D   L   G++++++ L DMFP T H E + L
Sbjct: 390 -QWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQTHHIEAMAL 444