Pairwise Alignments

Query, 550 a.a., flagellar hook-associated protein FlgK from Erwinia tracheiphila SCR3

Subject, 725 a.a., flagellar hook-associated protein FlgK from Dechlorosoma suillum PS

 Score =  241 bits (615), Expect = 7e-68
 Identities = 188/583 (32%), Positives = 278/583 (47%), Gaps = 87/583 (14%)

Query: 1   MSN-LINTALSGINAASAALNTTSNNISNYSVAGYSRQTTILAQSNSTLTGTNYIGNGVS 59
           MSN L    ++GINAA   L TT NNI+N    GY+RQ    + + S  TG+ +IG G  
Sbjct: 1   MSNGLFGIGITGINAAQMGLLTTGNNIANVDTPGYNRQRISQSNNISIATGSGFIGQGTR 60

Query: 60  VSSVNREYDVFITNQLRAASTSSSALSTQYSQLSNIDNMFSSTTNTLSTNMQGFFSSLQT 119
           V ++ R Y+  +T+Q+  + T +S LS  Y Q+  IDNM +     LS  +Q  F  +QT
Sbjct: 61  VDTITRIYNSVVTDQINQSQTKASELSKYYDQIKQIDNMLADDKAGLSPTLQDLFKGVQT 120

Query: 120 LVSNADDSSARQAVLGKADGLVNQFQVTDTYLKNLDSSLNTSVSSMVDQINGYAKQIANV 179
           + SN   +++R A++  A    ++ Q  ++ L  + S +N+ + S V  IN YA QIA +
Sbjct: 121 VASNPALTTSRDALVSSAKTFTSRLQNLESRLTAMYSGVNSQLESTVSAINSYATQIAEL 180

Query: 180 NQQITKLTGAGAGTAP-NDLLDQRDQLVSKLNDLVGVTVSQQDGGSYSISIGNGISLVQG 238
           N++I  +T   A   P N LLD+RDQL+++LN  V VT S+   G+ S+  G G  LV G
Sbjct: 181 NERI--VTAQAAVNQPANALLDERDQLIAELNKEVRVTTSEDSNGAISVFFGTGQQLVVG 238

Query: 239 DSYNQLAAVASSADPGRTTIATVDASTGAKTEIPEKLVATGSLGGLLAFRTD-LDNTRNQ 297
              + LA   S ADP R  +     + G   E+PE LV  G+LGGLLAFR++ LD   N 
Sbjct: 239 TKASTLAVQPSVADPQRMVVGM--RTVGGVQELPEYLVTGGNLGGLLAFRSESLDKAANS 296

Query: 298 LGQLALGLASSFNTQHEAGYDSNGDMGG------AFFNYGSPSVTTNTSNKGTASMTA-- 349
           LGQ+A  LA +FN QH  G D  G++ G       FFN   P    N  N GTA+++A  
Sbjct: 297 LGQVAASLALTFNAQHALGQDMLGNVAGDADFNADFFNISDPKSWANALNTGTATVSASF 356

Query: 350 -----MVADASAVEASNYKV--------SYDGTNW------------------------- 371
                MV +  A   +  K         + DGT W                         
Sbjct: 357 VNPPPMVLNGGAFSLTYDKTAGTYTAVRASDGTQWPGYTDLNSLVQQVYADTGTTLDMTS 416

Query: 372 -----NVT----RLS-DNASVTTTSSTDSSGNSTL----------SFDGLQLTLGGTAQA 411
                N+T    RL+ D A+ T T   D+   S            + DG+  ++     A
Sbjct: 417 AHYATNITASDYRLTYDGANYTLTRLADNKQWSDADPNALSATVGASDGINFSISAGIAA 476

Query: 412 KDSFLVKPVSNVISSMSVN--ITDEAKLAAA--------GSDGGVSDNINAQSLLDLQTK 461
            DSFL++P   +  ++SVN  I  +++L AA        GS    S  I++ ++    T 
Sbjct: 477 GDSFLIQPTREIARNISVNQAIAADSRLFAAAQPVRSGSGSSNTGSGVISSSTVSPGYTD 536

Query: 462 KVIGGDSTLTQAY--ASMVANIGNKTSTLETTST--TQTNVVT 500
                  T+T  +   ++  +IG   + L  T T  + TN V+
Sbjct: 537 PAAAPAGTITMTFNGGNLSFSIGGVPTALTVTYTDASGTNTVS 579



 Score =  104 bits (259), Expect = 1e-26
 Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 249 SSADPGRTTIATVDASTGAKTEIPEKLVATGSLGGLLAFRTDLDNTRNQLGQLALGLASS 308
           S ADP   + ATV AS G    I   + A  S                 L Q    +A +
Sbjct: 449 SDADPNALS-ATVGASDGINFSISAGIAAGDSF----------------LIQPTREIARN 491

Query: 309 FNTQHEAGYDSNGDMGGAFFNYGSPSVTTNTSNKGTASMTAMVADASAVEASNYKVSYDG 368
            +       DS           GS S  T +    +++++    D +A  A    ++++G
Sbjct: 492 ISVNQAIAADSRLFAAAQPVRSGSGSSNTGSGVISSSTVSPGYTDPAAAPAGTITMTFNG 551

Query: 369 TNWNVTRLSDNASVTTTSSTDSSGNSTLSFDGLQLTLGGTAQAKDSFLVKPVSNVISSMS 428
            N + + +    +  T + TD+SG +T+S         G+    +      ++ +   +S
Sbjct: 552 GNLSFS-IGGVPTALTVTYTDASGTNTVS--------AGSVPYNNPSTKYTINGISFEIS 602

Query: 429 VNITDEAKLAAAGSDGGVSDNINAQSLLDLQTKKVI-GGDSTLTQAYASMVANIGNKTST 487
            N  D        + GGVSD  NA  L  LQT+  + GG ST   +YA +V+ IGNKT  
Sbjct: 603 GNPADNDTFTLDRNSGGVSDGRNANLLGQLQTQGTVDGGASTYQASYARLVSTIGNKTRE 662

Query: 488 LETTSTTQTNVVTQLTNQQQSVSGVNLDEEYGNLTRYQQYYTANAQVIQTASAIFNALIT 547
            + T   Q  +V Q    +++ SGVNLDEE  NL +YQQ Y A+A++I  AS +FN +++
Sbjct: 663 TQVTRDAQQALVDQGVAAREAQSGVNLDEEASNLLKYQQAYQASAKMISIASDLFNTILS 722