Pairwise Alignments

Query, 382 a.a., transposase from Erwinia tracheiphila HP pepo 2.2

Subject, 367 a.a., IS605 family transposase OrfB (RefSeq) from Shewanella sp. ANA-3

 Score =  181 bits (458), Expect = 4e-50
 Identities = 120/361 (33%), Positives = 189/361 (52%), Gaps = 22/361 (6%)

Query: 5   AGACRFVFNRSLALQNENHEAGNKYISYAKMTVWLVEWKKEPDTQWLKASPSQPLQQALK 64
           +G  RFV+N  L  + +     +K ++Y   +  L E KK+ + +WL +    PLQQ+L+
Sbjct: 24  SGCVRFVYNAILKWRTDAFYNESKKVNYNTASSKLTELKKQTEFEWLNSVSCVPLQQSLR 83

Query: 65  ALERAYKNFFQKRALFPKFKKRGQSDSFRYPQGVKLDQENNRISLPKLGWINYRNSREVI 124
             + A+KNFF+ RA +P FKK+    S  + +     ++ N         ++ R SRE+ 
Sbjct: 84  HQQTAFKNFFEGRAKYPAFKKKRSKQSAEFTKSAFKFKDGNIYIAKSKQPLDIRWSRELP 143

Query: 125 GEVKNVTVSQ-SCGKWYVSIQTECEVSEPQHESTSMVGLDAGVAKLATLSDGTIFEPVNS 183
            E   VT+S+ S G+++VS+    E  +P   +    G+D G+  L   +DG  F+  N 
Sbjct: 144 SEPTTVTISKDSAGRYFVSMLCRFE-PKPLPVTKMTTGIDLGLTDLVITADG--FKSGNP 200

Query: 184 FKT--NQKKLARLQREMSRKVKFSNNWKKVKRKVQKLHSRIANIRRDYLHKVSTTISKNH 241
             T   +KKLA+ QR +S+K K + N+ K + KV ++ ++IA+ RRD+ HK++TT+   +
Sbjct: 201 RHTAKYEKKLAQAQRRLSKKKKGTANFHKARIKVARIQAKIADCRRDFTHKLTTTLINEN 260

Query: 242 AMIVIEDLKVASMSKSAAGTASQHGRNVRAKSGLNRSILDQGWYELRRQLEYKQLWRGGQ 301
            +I  E L V +M K+                 L ++I D  W E+ R LEYK  WRG  
Sbjct: 261 QVISCESLSVKNMVKNPR---------------LAKAIGDANWGEMVRHLEYKAEWRGRT 305

Query: 302 VLAINPAY-TSQKCACCGHTAKENRQSQSQFECLACGYTENADINGARNILAAGHAVLAG 360
           ++ I+  Y +S++C CCGH           + C AC    + D N A NI AAG AVLA 
Sbjct: 306 LVQIDKWYPSSKRCNCCGHVVDSLPLHIRHWTCPACEARLDRDTNAAINIKAAGQAVLAC 365

Query: 361 G 361
           G
Sbjct: 366 G 366