Pairwise Alignments

Query, 422 a.a., Porin D from Enterobacter sp. TBS_079

Subject, 428 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens GW456-L13

 Score =  486 bits (1250), Expect = e-142
 Identities = 242/427 (56%), Positives = 310/427 (72%), Gaps = 5/427 (1%)

Query: 1   MKKELSLIALSLFAALPAVASQQSDSKGFVDDSHLDLFLRNAYISRDYHQGQQDKAEWGQ 60
           + K +SLIAL + +A  A+A+ Q++SKGFV+DS L + LRNAYI+RDY  G  DK+EWGQ
Sbjct: 2   LNKRISLIALGMLSATQAMANDQAESKGFVEDSSLKVLLRNAYINRDYKDGNPDKSEWGQ 61

Query: 61  GIVATFESGYTEGLVGFGVDGIAQYGVRLDGGRGKSGAGGIDFFKQEDDGRAKSDLAKFG 120
             + TF SG+T+G VG GVD    Y + L+    +SGA GIDFFK+ D G+   DL+K G
Sbjct: 62  AAIGTFSSGFTQGTVGVGVDAFGLYALNLERNEDRSGAQGIDFFKKGDSGQPADDLSKGG 121

Query: 121 ATAKMRISNTVLSYGNQRPELPIVNADNSRLLFESFTGTMLTSKEIVGLEVNAGYFTDEQ 180
           A  K R+S+T L+YG+Q P LP++N DNSRLL ES+TGT++TSKEI GL+++AG FT E 
Sbjct: 122 AAIKFRLSSTTLTYGDQMPALPVLNYDNSRLLPESYTGTLITSKEIKGLQLDAGRFTAES 181

Query: 181 RKSDDRHDS-GLKSLSFGGASYQFNDQFSGALYASHVEEVMNKQYLGMNFKQPFSTGQQL 239
           RKS +  DS GLKS++  G SYQF +QF  ALYAS VE+V+ KQY+  N+  P    Q L
Sbjct: 182 RKSAEGRDSGGLKSINVLGGSYQFTEQFKAALYASDVEDVLKKQYVNANYVFPIDKDQSL 241

Query: 240 VLDFNGYNSRLDQRYA-DSLDTGRSNSIWSLAASYIWDIHTFKVAYQQSSGST--GYHYG 296
            LDFNGY ++L+  Y  ++  TG  N IWSLAA++I   H+F +A+Q+S+G +  GY YG
Sbjct: 242 TLDFNGYRTKLEDSYVRENGITGDDNKIWSLAATFITGPHSFTLAHQRSTGDSNLGYAYG 301

Query: 297 SY-RDQGGVGDGGNTIWLANSYWSDFNGEDERSWQASYALDFGGLGLPGLSWTTAYVRGD 355
            Y +DQG VGDGGNTI+LANSYWSDFN EDERSWQ  Y LDF   G+PGLS+  AYVRGD
Sbjct: 302 GYQKDQGRVGDGGNTIYLANSYWSDFNAEDERSWQVGYGLDFSTFGVPGLSYNVAYVRGD 361

Query: 356 NIKTSETSNGKEHEWFNQIQYQVQDGPAKDLKLKLRYSVLRVSSNASDYNVGGDEIRAYV 415
           NI TS +  G E E FNQI+Y VQ GPAKDL +KLR SVLRVS  +S+YNV G+E+R +V
Sbjct: 362 NITTSTSEGGTEREIFNQIKYVVQSGPAKDLSVKLRSSVLRVSQKSSEYNVSGNEVRVFV 421

Query: 416 EYPFNVF 422
           +YP N+F
Sbjct: 422 DYPINIF 428