Pairwise Alignments

Query, 352 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Enterobacter asburiae PDN3

Subject, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

 Score =  306 bits (784), Expect = 5e-88
 Identities = 167/341 (48%), Positives = 225/341 (65%), Gaps = 3/341 (0%)

Query: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTA 60
           +RKIIHVD DCF+AA+EMRD+P L   P+A+GGS   RGVI+T NY AR +GVRSAM + 
Sbjct: 3   LRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSR 62

Query: 61  MALKLCPHLTLLPGRFEAYKEASLHIRGIFSRYTSLIEPLSLDEAYLDVTDSVHCHGSAT 120
            ALKLCP L ++  RFEAY+EAS  I  IF  YT LIEPLSLDEAYLDV+DS    GSAT
Sbjct: 63  HALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGSAT 122

Query: 121 LMAQEIRQTIFNELNLTASAGVAPVKFLAKIASDLNKPNGQYVITPDEVPAFLKTLPLGK 180
            +A++IR+ +   L++T SAGVAP KFLAKIASD  KPNG +VITP+EV  F+  LP+ +
Sbjct: 123 RIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVAR 182

Query: 181 IPGVGKVSAAKLESMGLRTCEDVQRSDLAMLLKRFGKFGRVLWERSQGIDDRDVNSERLR 240
           + GVGKV+A KL  +G+ TC  ++      L++ FG FG  LW  ++GID+R V+++  R
Sbjct: 183 LHGVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRR 242

Query: 241 KSVGVERTLIEDIHDWSECETIITEQLYPELERRLSKVKPDLLIARQGIKLKFNDFQQTT 300
           +SV VE T   D+ D + C   + E L   L  R++++       +  +K+KF+DF QTT
Sbjct: 243 QSVSVENTYDTDLPDLASCLARLPE-LLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTT 301

Query: 301 QEHVWPRLNKDDLLATAKKAWEERRGGRGVRLVGLHVTLLD 341
            E      + +       +A+   RGG+ VRL+G+ V L D
Sbjct: 302 MEQAGAGRDLESYRQLLGQAF--ARGGKPVRLLGVGVRLRD 340