Pairwise Alignments

Query, 352 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Enterobacter asburiae PDN3

Subject, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  234 bits (598), Expect = 2e-66
 Identities = 143/355 (40%), Positives = 206/355 (58%), Gaps = 17/355 (4%)

Query: 5   IHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTAMALK 64
           +H+DMD FFA+VE  D+P+LR  P+ +GGS  +RGV+S A+Y AR++GVRSAMPT  A +
Sbjct: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSS-ERGVVSAASYEARRYGVRSAMPTVTARR 59

Query: 65  LCPHLTLLPGRFEAYKEASLHIRGIFSRYTSLIEPLSLDEAYLDVTDSVHCHGSATLMAQ 124
           LCPH   + GR   Y E S  +  +   ++ ++E  S+DEAYLD T      G    MAQ
Sbjct: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119

Query: 125 EIRQTIFNELN-LTASAGVAPVKFLAKIASDLNKPNGQYVITPDEVPAFLKTLPLGKIPG 183
            ++  +      LT S G+APVKFLAKIASD+NKP+G +++ P++V AFL TLP+G+IPG
Sbjct: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179

Query: 184 VGKVSAAKLESMGLRTCEDVQRSDLAMLLKRFGKFGRVLWERSQGIDDRDVNSERLRKSV 243
           VGK     L+ +G+RT  DV R  ++   +RFGK G VL++R++GID R +      KS 
Sbjct: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239

Query: 244 GVERTLIEDIHDWSECETIITEQLYPELERRLSKVKPDLLIARQ-GIKLKFNDFQQTTQE 302
             E TL  D  D      ++   L  + ER    ++   L  R   +K+K+ DF+Q T+ 
Sbjct: 240 SAEVTLAADTAD----RAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRS 295

Query: 303 HVWPRLNKDDLLATA---KKAW---EERRGGRGVRLVGLHVTLLDPQLERQLVLG 351
              P    + + AT    ++AW   E       VRLVGL V+    + +  L +G
Sbjct: 296 RTLP----EPVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIG 346