Pairwise Alignments

Query, 391 a.a., Integrase from Enterobacter asburiae PDN3

Subject, 421 a.a., Putative protein IntB from Escherichia coli ECOR38

 Score =  311 bits (796), Expect = 3e-89
 Identities = 161/405 (39%), Positives = 251/405 (61%), Gaps = 25/405 (6%)

Query: 1   MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT 60
           M L D+++R AKP  K Y L DG G+ LL+ PNGSK WR +YR+ GK KM++LGVYP IT
Sbjct: 1   MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT 60

Query: 61  LADARSRREDARKLVAEGKNPSEVRKEQKIALQTESENAFEKIATEWHQMKSTKWSAGYA 120
           LADAR RR++AR L+A G +P + +K  K+  +      F+++A EWH     KWS  +A
Sbjct: 61  LADARVRRDEARNLLANGVDPGDKKKNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHA 117

Query: 121 SDIMEAFQNDIFPYVGERPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA 180
             ++++ ++++F  +GER I E+K  +LL  ++ +E  G LE   +++QR + + RYA+ 
Sbjct: 118 HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ 177

Query: 181 TGRAEFNPAADLSSALEVHQSNHYPFLKADEITDFLRALDSYTGSRLVQIATKLLMITGV 240
           +G  ++NPA +++ A+      H P L+   I + L  +DSYTG  L + A +L ++  +
Sbjct: 178 SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFI 237

Query: 241 RTIELRAALWSEFDLDNALWEIPAER------------MKMRRAHLVPLSTQALDLLNEL 288
           R+ ELR A WSE D + ++W IP ER             KMR  HLVPLSTQAL +L ++
Sbjct: 238 RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI 297

Query: 289 KIMTGNYRYVFPGRNDPNKPMSEASINQLIKRIGYGGK--LTGHGFRHTLSTILHERGYE 346
           K   G +  +F G +D +KPMSE ++N  ++ +GY  K  + GHGFR    + L E G  
Sbjct: 298 KQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESG-- 355

Query: 347 SIW----IEMQLAHVDKNNIRGTYNH-AQYISNRRVMLSWYSDFI 386
            +W    +E Q++H+++N++R  Y H A+++  RR+ML W++DF+
Sbjct: 356 -LWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFL 399