Pairwise Alignments

Query, 391 a.a., Integrase from Enterobacter asburiae PDN3

Subject, 420 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dadantii 3937

 Score =  290 bits (741), Expect = 7e-83
 Identities = 152/404 (37%), Positives = 243/404 (60%), Gaps = 21/404 (5%)

Query: 1   MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPK--MISLGVYPT 58
           M LN  Q+  AKP+ K Y + DG GL L I P GSK WR +YR     K   ++ GV+PT
Sbjct: 1   MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT 60

Query: 59  ITLADARSRREDARKLVAEGKNPSEVRKEQKIALQTESENAFEKIATEWHQMKSTKWSAG 118
           +TLADAR++R++A+KL+ +G +P   +KE +   +T     FE IA +WH   + +W   
Sbjct: 61  VTLADARAKRDEAKKLLVQGIDPKAEQKEAQA--ETAGAYTFETIARQWHA-SNKRWGDY 117

Query: 119 YASDIMEAFQNDIFPYVGERPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYA 178
           + + +M   +  IFP++G   I ++K   LL  ++ ++  G  +  ++++QR + + RYA
Sbjct: 118 HRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRYA 177

Query: 179 IATGRAEFNPAADLSSALEVHQSNHYPFLKADEITDFLRALDSYTGSRLVQIATKLLMIT 238
           +     + NPA+D+S AL   ++ HYP L  + + +FL  L +Y G ++ +IA +L ++T
Sbjct: 178 VQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLT 237

Query: 239 GVRTIELRAALWSEFDLDNALWEIPAER------------MKMRRAHLVPLSTQALDLLN 286
            VR+ ELR A W EFD D A W +PA+R            MKM+  H+VPLS QA+ LL 
Sbjct: 238 FVRSSELRFAQWHEFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLE 297

Query: 287 ELKIMTGNYRYVFPGRNDPNKPMSEASINQLIKRIGYG--GKLTGHGFRHTLSTILHERG 344
           +LK ++G+ + +FPG +DP K MSE ++N  ++ +GY    ++ GHGFR      L E G
Sbjct: 298 QLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGESG 357

Query: 345 -YESIWIEMQLAHVDKNNIRGTYNH-AQYISNRRVMLSWYSDFI 386
            +    IE QL+H ++NN+R  Y H ++Y+  RR+M+ W++D++
Sbjct: 358 LWSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYL 401