Pairwise Alignments

Query, 263 a.a., Formamidopyrimidine-DNA glycosylase from Enterobacter asburiae PDN3

Subject, 270 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Pseudomonas fluorescens SBW25

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 27/280 (9%)

Query: 1   MPEGPEIRRAADSLEAAIKGKPLTDVW-----FAFPQLKPFESQLVGQTVTHIETRGKAL 55
           MPE PE+      +   ++G+ ++ V        +P  +  + +L GQ +  +E R K L
Sbjct: 1   MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60

Query: 56  LTHFSHNLTLYSHNQLYGVWRVVEADEQPQTTRVLRVRLQTADKAILLYSASDIEMLTPE 115
           L +     TL SH  + G  R+VE          + + L++              ML  +
Sbjct: 61  LINAEVG-TLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGMALRYTDPRRFGAMLWSQ 119

Query: 116 QLLTHPFLQRVGPDVL------DMRLTASDVKARLLSPKFRNRQFSGLFLDQAFLAGLGN 169
               H  L R+GP+ L      D     S  K+  + P           +D A + G+GN
Sbjct: 120 DPHNHELLLRLGPEPLTELFDGDRLFQLSRGKSMAVKP---------FIMDNAVVVGVGN 170

Query: 170 YLRVEILWEVGLAAQHKASQLNDEQLEALSHALLDIPRLSYNTRGVVDENTHHG----AL 225
               E L+  G+  +  A  ++  +   L+  +  +   +    G    +   G      
Sbjct: 171 IYATEALFAAGIDPRRAAGGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGY 230

Query: 226 FRFKVF--HRAGKKCERCGGIIDRIMLSSRPFYWCPHCQQ 263
           F+ ++F   R G+ C+ CG  +  ++L  R   +CP CQ+
Sbjct: 231 FQQELFVYGRGGEACKVCGTELRNVVLGQRASVFCPRCQR 270