Pairwise Alignments

Query, 546 a.a., flagellar hook-associated protein FlgK from Enterobacter asburiae PDN3

Subject, 682 a.a., flagellar hook-associated protein FlgK from Pseudomonas fluorescens SBW25-INTG

 Score =  243 bits (619), Expect = 2e-68
 Identities = 153/458 (33%), Positives = 251/458 (54%), Gaps = 14/458 (3%)

Query: 3   SLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGGWVGNGVYVSG 62
           SL+N  MSGL+AAQ +L+ +SNNI++ N AGY+RQ T+  A+ S   GG ++G+G  ++ 
Sbjct: 2   SLLNIGMSGLNAAQGSLSVLSNNIANANTAGYSRQQTIQSANASNQYGGVFIGSGTTLAD 61

Query: 63  VQREYDAFITNQLRAAQTQSSGLTTRYQQMSKIDDVLSDTTNSLSTTLQDFFKSLQTLVS 122
           V+R Y+ ++    + + + +S       Q+S +D  LSD T  +S+ L  FF ++QT  +
Sbjct: 62  VRRVYNEYLDTAYQNSTSLNSDAKAYLDQVSAVDKTLSDKTTGMSSVLSSFFAAVQTASA 121

Query: 123 NAEDPAARQTVLGKASGLVNQFKTNDQYLRDQDAQVNTAISSSVSQINNYAAQIANLNDQ 182
           N  D +ARQ +L  A  L N+F +    L  Q   +N+ ++S   Q+N   + IA+LN Q
Sbjct: 122 NPSDTSARQILLTSAQTLSNRFNSISSQLSQQKETINSQLTSLTDQVNQLTSSIASLNKQ 181

Query: 183 ISRLTGVGAGASPNDLLDQRDQLVTELNKIVGVEVSVQDSGTFNISLGNGYSLVQGSKAS 242
           I+++ G  +  +P +LLD R + V  LN+++GV  S + +G F++S G G SLV G +++
Sbjct: 182 ITQVQG-SSNTTPANLLDARAEAVRSLNELIGVNAS-EKNGVFSVSTGTGQSLVLGDRSN 239

Query: 243 QLAAVKSSADPARTTIAYVDDVAGNIEIPEKLITTGSLGGLLTFRAEDLDKARNSLNQMA 302
            L+AV S +D ++ TI  ++   G       +I+ GS+GGLL +R++ L  A N L ++A
Sbjct: 240 TLSAVPSKSDTSQYTI-QMNASGGTAMDLGNVISGGSIGGLLRYRSDVLMPAINDLGRIA 298

Query: 303 LAFADAMNTQHEAGFDANGDAGGKLF----NFGSPAVLSNSKNGGSAVVTASVT--DSKQ 356
           +  AD +N+Q   G D NG+ G  +F    +  S A+ S S  G   V +  VT  D+ +
Sbjct: 299 IVTADTINSQLGQGIDLNGEFGSSMFKDINSAASVALRSLSAQGNQGVGSLGVTIKDTSK 358

Query: 357 VQATDYKLQFNG----TDWTVTRTSDKTSFTMSPDASGNLSFDGLNVNV-SGTANTKDSF 411
           +   DYK+ F+        TV R+  K        A+     DG  + + +G     DSF
Sbjct: 359 LTNFDYKVTFSDPADLNKVTVERSDGKAMGAFDISATPPSVIDGFTLELTNGPMQAGDSF 418

Query: 412 TVKPVSNVIMNMDLAISDESKLAMASVQNGGESDNRNG 449
            V P ++   ++   ++D SK+A A+   G  S    G
Sbjct: 419 KVSPTASGAQDIGTVLNDPSKIAFAAPLKGEASKTNQG 456



 Score = 72.8 bits (177), Expect = 4e-17
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 6/109 (5%)

Query: 442 GESDNRNGQKLLDLQNGKVVG------GNKTFNDAYASLVSTVGSSTASLKVSSQTKANV 495
           G SDNRN Q+LL+LQ    VG      G  +   A + LVSTVG+  A+    +     +
Sbjct: 572 GVSDNRNAQQLLNLQTKATVGVATDGTGGTSLVGANSKLVSTVGAKAAAATTDTTATNAL 631

Query: 496 ETQLIKQQQTISGVNLDEEYGNLQRYQQYYLANAQVLQTASTLFDAIIN 544
            T     + ++S VNLDEE G++ ++QQYY A++Q+++ A   F  +IN
Sbjct: 632 LTANKNARNSVSQVNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLIN 680



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 475 VSTVGSSTASLKVSSQTKANVETQLIKQQQTISGVNLDEEYGNL 518
           +S + ++  SL V S   AN  T    +QQTI   N   +YG +
Sbjct: 8   MSGLNAAQGSLSVLSNNIANANTAGYSRQQTIQSANASNQYGGV 51