Pairwise Alignments

Query, 315 a.a., pseudouridine synthase, RluA family from Enterobacter asburiae PDN3

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  400 bits (1028), Expect = e-116
 Identities = 206/309 (66%), Positives = 240/309 (77%), Gaps = 5/309 (1%)

Query: 8   VKMVAIAEDDAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKLEAGDEVR 67
           V+ + I ED AGQRIDNFLR QLK +PKS++YRILRKGEVRVNKKRVK EYKLEAGD VR
Sbjct: 8   VQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVR 67

Query: 68  IPPVRVAEREEETVSP--KLQKVAALSDVILYEDDHILVLNKPSGTAVHGGSGLSFGVIE 125
           +PPV V  +E E   P  KL KVA L   I+YEDDH+L+LNKPSGTAVHGGSGL FG IE
Sbjct: 68  VPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIE 127

Query: 126 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQ 185
            LRALRP+ARFLELVHR+DRDTSG+LLVAKKRSALR L  Q REK +QK Y ALV G W 
Sbjct: 128 ALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187

Query: 186 SHVKVVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYEFATLVRCSPVTGRTHQIR 245
           +  KVV APLLKN + S   IVRV+  GKPSETRF++ E++  ATLV+ SPVTGRTHQIR
Sbjct: 188 AECKVVNAPLLKNEVNS---IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244

Query: 246 VHTQFAGHPIAFDDRYGDREFDKQLAGTGLSRLFLHAAALKFTHPNTGEVIRIEAPLDEQ 305
           VHTQ+ GHPIA+DDRYGDR FD   A  G+ RLFLHAA ++F HP + + + I APL+  
Sbjct: 245 VHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAH 304

Query: 306 LKRCLKVLR 314
           L++ L  +R
Sbjct: 305 LEQALTKMR 313