Pairwise Alignments

Query, 511 a.a., PAS domain S-box from Enterobacter asburiae PDN3

Subject, 521 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  251 bits (641), Expect = 4e-71
 Identities = 170/537 (31%), Positives = 266/537 (49%), Gaps = 70/537 (13%)

Query: 1   MRRNSPVTQNEYLLNDGSTLMSTTDTKSHITYANSAFIEASGYKEEHLLGEPHNLIRHPD 60
           MR N PVTQ E  L     L+STTD +  ITY N AF+E SG+    L+G P N++RHPD
Sbjct: 1   MRNNQPVTQREIALAPQQKLISTTDVRGVITYCNDAFVEISGFDRADLIGAPQNIVRHPD 60

Query: 61  MPAEAFGDMWFTLQQGETWTGLVKNRRHNGDHYWVRANVTPVWQGGSLTGYISVRNIPAR 120
           +P   F  MW  L+QG  W G+VKNR  NGDHYWV A VTP+++G  + G+ SVR  P  
Sbjct: 61  VPPAVFAHMWGALKQGNPWMGIVKNRSRNGDHYWVNAYVTPIFEGSQVVGFESVRVKPTA 120

Query: 121 EEIAASEKLYAKVRNNELKHYRFYKGLLVRRGLFSFMSLFKCLSTSKRIHLGIATTALLS 180
           ++I  +E LY ++R          K  +  R  +                       L  
Sbjct: 121 DQIRRAEALYKRIRQG--------KPAIPTRDKWQ--------------------PVLQD 152

Query: 181 CLAVYLFPDKLVQSGSLVLLFTSLAYYLHAQIARPVKSIVQQMQSVVSGRK--------- 231
           CL   +    LV +   +LL ++LA+ + A ++ P+  +  + Q   + R          
Sbjct: 153 CLPYLVM--GLVGTLGGMLLDSTLAFVVAAGVSAPLGLMTSRWQKQSTLRLLRMAEPSTS 210

Query: 232 ----TDYYHFDRIDDIGLMMRLVNQSGLNLNSL--VDDVGAQISGIGTISQQVAKEGA-- 283
                  Y  +R     L    V+Q+      L  + D   Q+SG+   S  +A + +  
Sbjct: 211 DQLIAQMYSDERGPQARLETAFVSQTARLKTCLTRLQDTAEQLSGLAGRSNVLASDSSQG 270

Query: 284 --ALQTRSEETADFLQQTASAVEEIASAVKQTAETAKEATEMADR-------TRDSAHRG 334
               +  +E+ +  + Q A+  +E+AS V++TA+  +EA ++  R       TR++  R 
Sbjct: 271 LDRQRVETEQVSAAVNQMAATTQEVASHVQRTADATREANQLTGRGRDVARDTREAIERL 330

Query: 335 EAMMKETIGMMQSVSQDNSQIVDIISVIDRIAFQTNILALNAAVEAARAGEAGRGFAVVA 394
            A++ ET   +  +++D+++I  ++ VI  IA QTN+LALNAA+EAARAG+ GRGFAVVA
Sbjct: 331 SAVVGETGQTVAQLAKDSNEIGTVVDVIKGIADQTNLLALNAAIEAARAGDMGRGFAVVA 390

Query: 395 AEVRNLAQHSATAAKEIKALIEKNVASVNAGVEKVE--------------QTETQLTVMI 440
            EVR LAQ ++ +  +I  LI K  AS N  V+ +E              + +  L  + 
Sbjct: 391 DEVRQLAQRTSESTTQIHGLITKLQASSNNAVQTMESGHRQAEEGVAWVLEADKALVGIS 450

Query: 441 DNVLRVSSLIKEIGHATQEQTQALTLINASISRIGAMTHNNTGMVDNVTHAANHLTQ 497
           + V  ++ +  +I  AT+EQT     I+ +IS I  +    +    +    +N LT+
Sbjct: 451 EAVANIADMTTQIAAATEEQTAVAEEISRNISTIAHLADQTSEQAHHSAELSNELTK 507