Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC100

Subject, 376 a.a., flagellar motor protein MotB from Dickeya dadantii 3937

 Score =  377 bits (969), Expect = e-109
 Identities = 203/308 (65%), Positives = 239/308 (77%), Gaps = 19/308 (6%)

Query: 1   MKNQAHPIIVVKRRKAKSHGAAH--GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQI 58
           MK+Q HPII   R+K KS  AAH  GSWKIAYADFMTAMMA FLVMWLI+ISSP +L QI
Sbjct: 1   MKHQ-HPII---RKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQI 56

Query: 59  AEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKL 118
           AEYFRTPL  A+T G ++S++ +PIPGGG D TQ +G+V +Q  I+ +  R+E+ +L KL
Sbjct: 57  AEYFRTPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQ--IDTMDGRLEEIKLNKL 114

Query: 119 RGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRA 178
           R  LDQLIE+DP+L+ALRPHL I++V EGLRIQIIDS NRPMF+TGSA VEPYM DILRA
Sbjct: 115 RERLDQLIEADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRA 174

Query: 179 IAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRV 238
           IAP+LN IPN+ISLSGHTDD  YA GE+GYSNWELSADRANASRREL++GGL  GKVLRV
Sbjct: 175 IAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIIGGLAEGKVLRV 234

Query: 239 VGMAATMRLSD-RGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALE-------- 289
           VGMA TM L   +G  DA+NRRISL+VLNKQA++ I  ENAES    +  +E        
Sbjct: 235 VGMADTMNLKQAKGGSDAINRRISLVVLNKQAQENIERENAESSAVNIDKIENLQNMGMD 294

Query: 290 --KPEVAP 295
             KP  AP
Sbjct: 295 KVKPATAP 302