Pairwise Alignments

Query, 291 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Escherichia coli ECOR38

Subject, 626 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  167 bits (424), Expect = 4e-46
 Identities = 105/243 (43%), Positives = 146/243 (60%), Gaps = 10/243 (4%)

Query: 2   SEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRE 61
           +E++ KV+ARAG GSRREIE  IEAGRV+V+G++      V VTP   I IDG  +  RE
Sbjct: 29  AERVAKVVARAGLGSRREIEEWIEAGRVAVNGEVLT-SPAVTVTPADAITIDGEPLPERE 87

Query: 62  SAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTT 121
                 R+  Y+KP+G + T  DPEGR T+F+ LPK    R ++VGRLD+N+ GLLL T 
Sbjct: 88  RT----RLFLYHKPKGVVTTNRDPEGRTTLFEILPKGL-PRLVSVGRLDLNSEGLLLLTN 142

Query: 122 DGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGIN 181
           DG LA  L  P     R Y VR  G++D AKL  L +G+ ++         +    +G N
Sbjct: 143 DGGLARVLELPETGWLRRYRVRANGEIDQAKLDTLIKGITVDGVEYGPIEAELDRVQGAN 202

Query: 182 QWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLR 241
            W  V+L EG+NRE+R ++ A+G+ V+RLIRV YG   L + +P G   E+   +T  LR
Sbjct: 203 AWITVSLREGKNREIRNVFGALGLAVNRLIRVSYGPFQLGE-IPEGSVEEV---RTRVLR 258

Query: 242 ELV 244
           + +
Sbjct: 259 DQI 261