Pairwise Alignments

Query, 455 a.a., serine endoprotease DegQ from Escherichia coli ECOR38

Subject, 450 a.a., serine protease, HtrA/DegQ/DegS family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  466 bits (1200), Expect = e-136
 Identities = 247/458 (53%), Positives = 332/458 (72%), Gaps = 11/458 (2%)

Query: 1   MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEG 60
           MK +  +LSA  L+  LT+  +    A+IP  V  Q+ +PSLAPMLE+  PAVVSV V G
Sbjct: 1   MKTKLSVLSAAMLAATLTMMPAVSQ-AAIPQSVEGQS-IPSLAPMLERTTPAVVSVAVSG 58

Query: 61  TASQGQKIPEEFKKFFGDDLPDQPAQ--PFEGLGSGVIINASKGYVLTNNHVINQAQKIS 118
           T    Q++P+ F+ FFG + P +  Q  PF GLGSGVII+A KGY++TNNHVI+ A  I 
Sbjct: 59  THVSKQRVPDVFRYFFGPNAPQEQVQERPFRGLGSGVIIDADKGYIVTNNHVIDGADDIQ 118

Query: 119 IQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLG 178
           + L+DGRE  AKLIG+D +SDIALLQI+    L  I  +DSD+LRVGDFAVA+GNPFGLG
Sbjct: 119 VGLHDGREVKAKLIGTDSESDIALLQIE-AKNLVAIKTSDSDELRVGDFAVAIGNPFGLG 177

Query: 179 QTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGG 238
           QT TSGIVSALGRSGL +E LENFIQTDA+IN GNSGGAL+NL GELIGINTAI+AP GG
Sbjct: 178 QTVTSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLKGELIGINTAIVAPNGG 237

Query: 239 SVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVL 298
           +VGIGFAIP+NM + L  Q+ + GE++RG+LGI G ++ + +A+ F LD Q G FV+EV 
Sbjct: 238 NVGIGFAIPANMVKNLIAQIAEHGEVRRGVLGIAGRDLDSQLAQGFGLDTQHGGFVNEVS 297

Query: 299 PGSGSAKAGIKAGDIITRLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTL 358
            GS + KAGIKAGDII  ++G+ + SF ELR+++AT   G KV+LGL+R+G    V VTL
Sbjct: 298 AGSAAEKAGIKAGDIIVSVDGRAIKSFQELRAKVATMGAGAKVELGLIRDGDKKTVNVTL 357

Query: 359 -DTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGV 417
            + + ++  +A  + P L+GA+     L++  KG++I +V +GSPAA +GLQK D+I+G+
Sbjct: 358 GEANQTTEKAAGAVHPMLQGAS-----LENASKGVEITDVAQGSPAAMSGLQKGDLIVGI 412

Query: 418 NRDRVNSIAEMRKVLAAKPAIIALQIVRGNESIYLLMR 455
           NR  V  +  ++++L  +   +AL+IVRG   +YL++R
Sbjct: 413 NRTAVKDLKSLKELLKDQEGAVALKIVRGKSMLYLVLR 450