Pairwise Alignments

Query, 343 a.a., multidrug efflux transporter periplasmic adaptor subunit MdtN from Escherichia coli ECOR38

Subject, 402 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  142 bits (359), Expect = 1e-38
 Identities = 108/337 (32%), Positives = 160/337 (47%), Gaps = 24/337 (7%)

Query: 9   PRSKFPALLVVALALVALVFVIWRVDSA---PSTNDAYASADTIDVVPEVSGRIVELAVT 65
           PR     LL   + L A+ + +W          T+DAY + + + + P+V G +V +   
Sbjct: 27  PRGLLLRLLGGVMLLAAVGWSLWYFLDGRWYEGTDDAYVNGNVVQITPQVPGTVVSIGAD 86

Query: 66  DNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEK 125
           D   V  GD+L R+DP   +  LA A+A+LAA  +++     S++  Q    +    V+K
Sbjct: 87  DGDLVHAGDVLVRLDPSDADVALAGAKANLAATVRKVRGLYSSMNGAQADVAARKTAVDK 146

Query: 126 ARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGV 185
           ARA         +R   L K G +SAE++  A  A  +AE+  N V  Q Q   S V   
Sbjct: 147 ARA-------DYQRRVALAKSGAISAEELAHASDALTSAES--NLVTAQQQYQTSKVLVD 197

Query: 186 DALVAQRAAVEADIALTK---LHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDT 242
           D +VA    V+A  A  +   L  E AT+ AP DG V      VGQ       +  ++  
Sbjct: 198 DTVVASHPDVQAAAARLRAAFLDDERATLVAPVDGYVAKRSVQVGQRVQPGAALMAVVPL 257

Query: 243 RHWYVIANFRETDLKNIRSGTPATIRLMSDSGK-TFEGKVDSIGYGVLPDDGGLVLGGLP 301
              +V ANF+ET L ++R G P TI      GK  ++GKV S+G G      G     LP
Sbjct: 258 HQVWVDANFKETQLTDMRIGQPVTIESDVYGGKVAYKGKVQSLGVGT-----GSAFSLLP 312

Query: 302 KVSRSINWVRVAQRFPVKIMVEKP---DPEMFRIGAS 335
             + + NW+++ QR PV+I+ + P   D    RIG S
Sbjct: 313 AQNATGNWIKIVQRIPVRIVFDDPAQLDRHPLRIGMS 349