Pairwise Alignments

Query, 318 a.a., sugar ABC transporter permease from Escherichia coli ECOR38

Subject, 321 a.a., Ribose import permease protein RbsC from Escherichia fergusonii Becca

 Score =  168 bits (426), Expect = 1e-46
 Identities = 104/295 (35%), Positives = 158/295 (53%), Gaps = 10/295 (3%)

Query: 13  LIGLLVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTMLCGGINLSIIATA 72
           LI LLVL +A  S   P  F++I+N  ++  Q  V  I+A+ M + +L  GI+LS+ +  
Sbjct: 23  LIALLVL-IAIVSTLSPN-FFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLL 80

Query: 73  NACSLVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRVSPILATLGMMTL 132
                V A +       +  V A L  GA     IG   GV++A  RV   +ATL MM L
Sbjct: 81  ALTGAVAASIVGIEVNALVAVAAALALGAA----IGAVTGVIVAKGRVQAFIATLVMMLL 136

Query: 133 LKGVNILVTGGSAI----ANYPSWVLWLNHAQWFGIPLPMWLFTAVALGLWILLEKTPLG 188
           L+GV ++ T GS +            W    +  G+P P+W+   V L  W +L  T LG
Sbjct: 137 LRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLG 196

Query: 189 KAIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKASYGESYLLV 248
           + IY +G NE AT  SGIN  ++ I VY +  LL ++A  + +++L+SA+ + G  Y L 
Sbjct: 197 RYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELD 256

Query: 249 SILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGTLLL 303
           +I A VLGG +  GG GRI+G ++   +L  + +G N+LG+S Y  M +   ++L
Sbjct: 257 AIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVIL 311