Pairwise Alignments

Query, 335 a.a., type 1 fimbria D-mannose specific adhesin FimH from Escherichia coli ECOR38

Subject, 356 a.a., fimbrial protein from Escherichia coli ECOR38

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 25/206 (12%)

Query: 144 SRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPNDPL--VTPVYTISFGGRVEVPQNCEL 201
           ++ I    + + F   + +P  ++  +Y T + + P+    P+  +   G +  PQ+CE+
Sbjct: 157 AKAIIYFYIKKTFAGKLIVPETLVAKLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEI 216

Query: 202 NAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAIKCTN--------VAAQAYLTM 253
           N+ + + FDF +I A+ FS+          +  TK++ I+C N        ++   Y T 
Sbjct: 217 NSLRPINFDFKEIPAADFSSVAGSTVTTHKI--TKTVTIECENLGILNTDDISTSFYAT- 273

Query: 254 RLEASAVSGQAMVSDNQDLGFIVADQNDTPIT------PNDLNSVIPFRLDAAAAANVTL 307
                +     +V+ N ++G  + D+N+  I       P D+     F      A +VT 
Sbjct: 274 ---EPSTDNSMVVTSNPNVGIKIYDKNNKEINVNGGELPTDMGKSNVF---GEKAGSVTF 327

Query: 308 RAWPISITGQKPSEGPFSALGYLRVD 333
            A P S+TG +P+ G F+A   + ++
Sbjct: 328 SAAPASLTGARPAPGTFTATATITIE 353