Pairwise Alignments

Query, 363 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 326 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (337), Expect = 3e-36
 Identities = 109/363 (30%), Positives = 161/363 (44%), Gaps = 45/363 (12%)

Query: 1   MFAFILRRFGVMALTALCVTFIVFFMTNLQPNLEKVAKSEGSVRMTDAEVASWLSN-NGY 59
           +F F LRR      + L +   VF +  L P  + V      +   DA++   L +  G 
Sbjct: 3   LFLFALRRLATSIPSLLIILVGVFLLLQLAPG-DTVDALLAQMGGGDAQIIETLRHFYGL 61

Query: 60  DRPMLVRYGEWLGLVPGWTRTLEDGGMRGRCIDGIWRSGDPEPPGFCGLLQGDFGTSTVF 119
           D P+ V+ G +L                                    L+Q D G S ++
Sbjct: 62  DAPVAVQLGRYL----------------------------------LRLVQFDLGYSAIY 87

Query: 120 KADVGGVIAERLALTGKLMFWVMVVMVPSALLVGVLAGMREGSRTDRTLSTASIITTATP 179
              V  VI ERL +T  LM   +VV V   + +GVLA  R     D  +ST  ++  ATP
Sbjct: 88  GKPVIDVIVERLPVTLLLMGASLVVAVSGGVALGVLAARRVNKWPDTLISTLGLVFYATP 147

Query: 180 EYVSGVVLVVLFASSTAGLSPL-FAEWGWIDGRTILKGSAASAAEDATLENFTLPVLTMA 238
            +  G++ VV+FA     L P  F E G         G            +  LP +T++
Sbjct: 148 SFWLGLMAVVVFAVKLGWLPPGGFEEVG--------AGYQGLTRALDIARHMALPTITLS 199

Query: 239 LYGMGYIARMTRASMAEVMTAQYIRTARLKGVSFRNIVLKHALRNALIAPFTVIMLQFPW 298
           L  +    R+ RASM EV +  ++RTAR KGV    IV  H LRNAL+   T+I L    
Sbjct: 200 LIFLATYLRIMRASMLEVSSLDFVRTARAKGVDETKIVTHHVLRNALLPMLTLIGLNAST 259

Query: 299 LLTGVVIVETLFNYKGFGWTLVQAASNNDVELLLSCSVVAVIVVLVTQLISDIGYVFLNP 358
           +L G V+VE++F   G G    ++    D+  LL   +++ ++V+V   I D+ Y  L+P
Sbjct: 260 MLGGSVVVESVFTLPGLGRLAYESVVQRDLNTLLGIVLLSAVLVIVVNFIVDLLYARLDP 319

Query: 359 RIR 361
           RIR
Sbjct: 320 RIR 322