Pairwise Alignments

Query, 422 a.a., diaminopimelate decarboxylase from Cupriavidus basilensis FW507-4G11

Subject, 414 a.a., diaminopimelate decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  473 bits (1218), Expect = e-138
 Identities = 241/416 (57%), Positives = 302/416 (72%), Gaps = 6/416 (1%)

Query: 5   FHRHDGALSVEHVPLARIAAEYGTPTYVYSRAALTAAYQAYAAACQGRRARVQYAMKANS 64
           F   D  L  E   +  +A  YGTP Y+YSRA L   + A+  A  G    V YA+KANS
Sbjct: 4   FLYQDNTLYAEGCRVNDLAQTYGTPLYIYSRATLERHWHAFNNAVAGHPHLVCYAVKANS 63

Query: 65  NLAILQVFARLGAGFDIVSGGELQRVLAVGGDPRKVVFSGVGKTAAEMELALQHDVLSFN 124
           NLA+L V ARLG+GFDIVSGGEL RV+  GGDP KVVFSGVGKT AEME AL   +  FN
Sbjct: 64  NLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFN 123

Query: 125 VESIPELDRLNAVAGRLGKRARVSLRINPDVDAKTHPYISTGLKGNKFGVAFEDVLPTYR 184
           VES  EL++LN VAGRLGK A VSLR+NPDVDA THPYISTGLK NKFG+A ++    + 
Sbjct: 124 VESSAELEQLNLVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAVFA 183

Query: 185 AAAALPHLEVAGIDCHIGSQITEVAPYLEALDKVLDVVEALEREGINLEHIDVGGGLGIT 244
            A ALPHL+V G+DCHIGSQ+TE+ P+L+A+D++L +++ L  +GI +EH DVGGGLG+T
Sbjct: 184 RAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGLGVT 243

Query: 245 YDDETPPDITGFARTLLDRVAERGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNF 304
           YDDETPP    +A  LL R+   GH   +++FEPGR++  NAG+ +T+V +LK  + K F
Sbjct: 244 YDDETPPHPDVYAAALLKRL---GHRKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRF 300

Query: 305 CIVDAAMNDLARPAMYEAYHRIEPVQLREAAQATALTYDVVGPVCESGDWLGRDRALAVQ 364
            IVD AMNDL RPA+Y A+ +I PV  R+     A  +D+VGPVCE+GD+LG+DR  A+ 
Sbjct: 301 AIVDGAMNDLIRPALYSAWQKIIPVTPRD---DQAHVFDIVGPVCETGDFLGKDREFAIA 357

Query: 365 PGDLLAVMSAGAYGFVMSSNYNTRPRAAEVMVDGDDVHLVRGREHVADLFRDERLL 420
           PGDLL V S+GAYGF M+SNYNTRPRAAEVMVDGD  +LVR RE +  L++ E+LL
Sbjct: 358 PGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLPQLWQGEQLL 413