Pairwise Alignments

Query, 398 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  150 bits (378), Expect = 9e-41
 Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 30/350 (8%)

Query: 38  SVGVDGESWNAYGLRLPDRLPELLRTVKSGEYKAPQIRRVYIPKGKTGKRPLGIPTIEDK 97
           + G DG S  A    L    P++   V +G Y+   +RRV IPK   G+R LGIPT+ D+
Sbjct: 68  AAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPVRRVTIPKPDGGERELGIPTVTDR 127

Query: 98  VLQPSVRSVLEPIYEEDFKEFSYGFRPNRSCHHAIEYMFEKVSYGRMRYIIDADIQDYFG 157
           ++Q ++  VL+P+ +  F E S+GFRP RS H A+      V  GR R ++D D++ +F 
Sbjct: 128 LIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLEAQSYVQSGR-RIVVDVDLEKFFD 186

Query: 158 SIDHGLLRVFLDRRVKDGVVRKMLDKWLKAGILEDKQLHYPKGGTPQGGIVSPILSNIYL 217
            ++H +L   L +R+ D  V +++  +L +GI++   +     GTPQGG +SP+L+N+ L
Sbjct: 187 RVNHDILIDRLSKRISDRRVIRLIRAYLNSGIMDHGVVQERVMGTPQGGPLSPLLANVLL 246

Query: 218 HYVLDEWFSDKIQPLLTGKSF-MVRYADDFVMGFEKGEDAKRVMAVLDKRFTKYGLRLHP 276
                    D++   L  +    VRYADD  +     +  +RVMA+L + + +  L ++ 
Sbjct: 247 ---------DEVDKELERRGHCFVRYADDCNVYVGSRKAGERVMALLRRLYGRLHLTINE 297

Query: 277 EKTKVIDLNTNIRGERSFDFLGFAHYMGKTRKGRLVLKRKTSSKKLVMAITKTGDWIKGN 336
            K+ V    T++ G +   FLGF+ + G+       +KR+ + K L     +     + +
Sbjct: 298 GKSAV----TSVFGRK---FLGFSFWRGRDG----AVKRRVADKPLNAFKRRVRQLTRRS 346

Query: 337 RHRKLKELICDLNVRLRGHYAYYGVTFNVRSLNKYHRCVERLLHKWLNRR 386
             R + E+   L V + G  AY+ +    R   +        L +W+  R
Sbjct: 347 GGRSMAEVAERLRVYVLGWKAYFRLAQTPRLFKE--------LEEWMRHR 388