Pairwise Alignments

Query, 381 a.a., flagellin from Burkholderia phytofirmans PsJN

Subject, 585 a.a., flagellin FliC from Escherichia coli ECRC100

 Score =  175 bits (444), Expect = 3e-48
 Identities = 136/383 (35%), Positives = 189/383 (49%), Gaps = 25/383 (6%)

Query: 4   INSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGLNQG 63
           IN+N  SL+ Q N+N +QSALS +I RLSSG RINSA DDAAG AI+ R  + I GL Q 
Sbjct: 5   INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64

Query: 64  VSNANDGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIAEVN 123
             NANDG+S+ QT   ALS + ++LQRIR+L VQA+TG+ S SD  ++Q E+ +++ E++
Sbjct: 65  ARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEID 124

Query: 124 RIASQTTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTVGTI 183
           R++ QT +NG N+L    GS+  QVGAN G+TI++DL +  S      G    G+  GTI
Sbjct: 125 RVSGQTQFNGVNVL-AKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGK--GTI 181

Query: 184 AVSLNASGAYTSTGATITSVNVLSDGKGGYTF--TDQ------NNTAITSGVSSAIFTAG 235
                     TS GA + +   L D K   T   TD       N   +T G     + A 
Sbjct: 182 TNKAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAK 241

Query: 236 TAAGT---GTAVTNLTLSASAVTTAGAGSAAAVASVAQI-NAINNPPTVSGLDISTVT-- 289
           +   T    TA T +  +A A  +A    A A    A +  ++N   T     +S  T  
Sbjct: 242 SGDFTTTKSTAGTGVDAAAQAADSASKRDALAATLHADVGKSVNGSYTTKDGTVSFETDS 301

Query: 290 ------GANEAMVSIDNALQTVNTLQAALGAAQNRFTAIATSQQAESTDLSSAQSQITDA 343
                 G ++A V     L T N   AA    +    A +      S   +  +  I  A
Sbjct: 302 AGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASLTFNGTEYTIAKA 361

Query: 344 NFAQET--ANLSKAQVLQQAGIS 364
             A  T  A L    +  QA +S
Sbjct: 362 TPATTTPVAPLIPGGITYQATVS 384



 Score =  110 bits (275), Expect = 1e-28
 Identities = 105/373 (28%), Positives = 165/373 (44%), Gaps = 56/373 (15%)

Query: 29  TRLSSGKRINSAADDAAGL----AISTRMQTQINGLNQGVSNANDGVSMIQTASSALSSL 84
           T+ ++G  +++AA  A       A++  +   +     G     DG    +T S+   ++
Sbjct: 248 TKSTAGTGVDAAAQAADSASKRDALAATLHADVGKSVNGSYTTKDGTVSFETDSAGNITI 307

Query: 85  TSSLQRIRQLA--VQASTGSLSSSDQAALQKEVSAQIAEVNRIASQTTYNGTNILDGSAG 142
             S   +         + GS + +D  AL K  S          +  T+NGT      A 
Sbjct: 308 GGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASE-----GSDGASLTFNGTEYTIAKAT 362

Query: 143 SVT-------FQVGANVGQTISLD--LSQSMSAAKIGGGLVQTG---QTVG-TIAVSLNA 189
             T          G     T+S D  LS++ +AA        +G   +T+G T   S +A
Sbjct: 363 PATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLSKTIGFTAGESSDA 422

Query: 190 SGAYTSTGATITSVNVLSDGKGGYTFTDQNNTAITSGVSSAIFT-AGTAAGTGTAVTNLT 248
           + +Y      IT+V   +D    Y+    N +   +G +SA  T    A   GTAV   +
Sbjct: 423 AKSYVDDKGGITNV---ADYTVSYSVNKDNGSVTVAGYASATDTNKDYAPAIGTAVNVNS 479

Query: 249 LSASAVTTAGAGSAAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDNALQTVNTL 308
                  T  AGSA             NP                 + ++D+A+ +++  
Sbjct: 480 AGKITTETTSAGSATT-----------NP-----------------LAALDDAISSIDKF 511

Query: 309 QAALGAAQNRFTAIATSQQAESTDLSSAQSQITDANFAQETANLSKAQVLQQAGISVLAQ 368
           +++LGA QNR  +  T+    +T+LS AQS+I DA++A E +N+SKAQ++QQAG SVLA+
Sbjct: 512 RSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAK 571

Query: 369 ANSNPQQVLKLLQ 381
           AN  PQQVL LLQ
Sbjct: 572 ANQVPQQVLSLLQ 584