Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  173 bits (438), Expect = 3e-47
 Identities = 118/342 (34%), Positives = 159/342 (46%), Gaps = 34/342 (9%)

Query: 2   QPVFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRA 61
           Q  F RA A HR G    AE  Y A L  +P HV+AL+  GVL  Q G+  ++ + + RA
Sbjct: 3   QETFARAQAEHRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRA 62

Query: 62  VNLRPEDAALQLN----------------------------------LGNALKALGQIDD 87
             L PED  +  N                                  LG  + A G+ D+
Sbjct: 63  ARLAPEDGRIGRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDE 122

Query: 88  AIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNAL 147
           AI  F+  L LA     A  NLG A  AAGR ++A DAF K+  L P  A +H N G AL
Sbjct: 123 AISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGAL 182

Query: 148 HALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAA 207
            A GR  +A+ A+ R + L P HA    +MG++L  LGR EEA  CF+ A+  +P   A 
Sbjct: 183 FAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAH 242

Query: 208 HFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVG 267
            +NL       GR  +A   +   +A+ P+   A    G     LG+  +A+   +R + 
Sbjct: 243 GYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLE 302

Query: 268 LDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASA 309
           LDP    AWL+ G A    G    A+ +   ALRL PD A A
Sbjct: 303 LDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDADA 344



 Score =  154 bits (388), Expect = 2e-41
 Identities = 98/265 (36%), Positives = 134/265 (50%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
           GRL ++ER +    D  P   +    LG++   QG+  EA    +  + L  +D   + N
Sbjct: 84  GRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCN 143

Query: 75  LGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQP 134
           LG A +A G++D+AI+ F  A  LAP+   AH NLG A  AAGR  DA  A+ ++L L+P
Sbjct: 144 LGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEP 203

Query: 135 DDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCF 194
           + A    + G AL  LGR  EA   FRR +EL PG+     N+G +L  LGR E+A   +
Sbjct: 204 NHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIY 263

Query: 195 QTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGR 254
              +A  P   +AH N    F   G+  +AVAS+   L L P   PA    G AL   GR
Sbjct: 264 AKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGR 323

Query: 255 HAEALPYLERAVGLDPQFALAWLSL 279
             +AL     A+ L P  A A   L
Sbjct: 324 VEDALDSFRSALRLMPDDADALCEL 348



 Score =  115 bits (289), Expect = 6e-30
 Identities = 80/238 (33%), Positives = 115/238 (48%), Gaps = 4/238 (1%)

Query: 10  AAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDA 69
           A    GRLD+A   +    +  PA   A   LG      G+ A+A     RA+ L P  A
Sbjct: 147 ACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHA 206

Query: 70  ALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKS 129
            ++ ++G AL  LG+ ++A E FR A+ L P  P   YNLG A    GR EDAA+ + K 
Sbjct: 207 EVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKV 266

Query: 130 LRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEE 189
           + + PD AS+H N G     LG+  +A+A++ R +EL P +  A  N G +L   GR E+
Sbjct: 267 IAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVED 326

Query: 190 AIPCFQTALAAEPRFVAAHFNLAN----TFDATGRHAEAVASFKAALALQPNLPPAIF 243
           A+  F++AL   P    A   L N      D  G  AE     +     +  + P +F
Sbjct: 327 ALDSFRSALRLMPDDADALCELVNLRKVICDWDGLEAEEALCRRQVADGKAGIDPQVF 384