Pairwise Alignments

Query, 310 a.a., spermidine synthase from Burkholderia phytofirmans PsJN

Subject, 247 a.a., hypothetical spermidine synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 6e-15
 Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 3/168 (1%)

Query: 62  FAPVTFSEEGGVRFLHFGTEWVQGAMRLRKPDHIELEYAQQMMAWLLFIETPRRIVQLGL 121
           F P+   + G  R L FG    Q  +    P   +  Y Q MM  LLF + P+  + LGL
Sbjct: 14  FGPIRVLDYGDSRVLSFGDNDEQSKILKTAPHIPQHTYVQGMMLVLLFCK-PKSAIVLGL 72

Query: 122 GAAALTKFAHRFLTRAKVEAVEVNPAVVVAARTMFELPHDDARLTVHETDAWDFVNDRAN 181
           G  AL     RF    K+ AVE+ P V+  A+  F+LP    +L V   DA  F+   A 
Sbjct: 73  GGGALIHVLRRFDAAIKLTAVELRPTVIELAKHYFQLP-IGKKLNVINDDALVFMAS-AE 130

Query: 182 HGTIGALQIDVYDATARGPVLDSVGFYRAVRACLTDAGVVTVNLFGDH 229
           H  +  +  D+Y A        S  F       +   G + +N + +H
Sbjct: 131 HKKVDVIFADIYSAKGVNTGQLSATFLEQCTQRIKPNGYLVLNCWKEH 178