Pairwise Alignments

Query, 650 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 458 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Pseudomonas segetis P6

 Score =  219 bits (558), Expect = 2e-61
 Identities = 147/383 (38%), Positives = 205/383 (53%), Gaps = 57/383 (14%)

Query: 55  MAPIMFGVLVVMLLLGYPVAFALAANGLLFGLIGIELGLFRPDLFQALPERIYGTMNNDV 114
           M  ++F  + + L+ GYPVAF L    LLF  IGI  G F      ALP R++G MNN  
Sbjct: 5   MPILLFICICLALMAGYPVAFTLGGVSLLFAGIGIVTGTFDATYLSALPNRLFGIMNNQT 64

Query: 115 LLAVPFFTFMGLVLERSGMAEDLLDTIGQLFGSIRGGLAYAVIFVGALLAATTGVVAASV 174
           +LAVP F FMG++LE+S +AEDLL+++ +LFG++RGGLA +V  VGALLAA+TG+V A+V
Sbjct: 65  MLAVPLFVFMGVMLEKSRVAEDLLESMSRLFGTLRGGLAISVCVVGALLAASTGIVGATV 124

Query: 175 ISMGLISLPIMLRYGYDRRLASGIIAASGTLAQIIPPSLVLIVMADQLGR---------- 224
           ++MGL++LP MLR GYD  +A+G +AA+GTL QIIPPS+VL+++ D +            
Sbjct: 125 VTMGLLALPTMLRRGYDPAIATGTLAATGTLGQIIPPSIVLVLLGDVMSSAYQQAQLKMG 184

Query: 225 -------SVGDMYEAAFIPGLLLAGLYALYVFIVSLIWPKAAPGLPPEAIAYREPNGARG 277
                  SVGD++  AF+PG+LL GLY LY+  V++  PK  P LP E +   E      
Sbjct: 185 IFSPKTVSVGDLFVGAFLPGMLLVGLYILYIIGVAIFQPKKLPALPQEELGPIE------ 238

Query: 278 VWQLGVLALFSGAVAYWVMGRTGVKSGADYVVLLLSVAVTVAFLAATFNRTFGAQRLALQ 337
            W                    G  + A    L+L  AV  + LA     T  A   AL 
Sbjct: 239 -W--------------------GKLANALIPPLILIAAVLGSILAGYATPTEAAALGALG 277

Query: 338 AAVTAVLTAGAAWLTLN----GSTTLALLGDSVAAGALYALAVALVERASGRRLISRMAE 393
           A V A L     +  L     G+T ++ +   +  G   A   +LV R  G  ++     
Sbjct: 278 AMVLATLKGKLNFTQLKEVAYGTTEISSMVFMILIG---ASLFSLVFRGFGGEILI---- 330

Query: 394 QATFVMVP--PLALIFLVLGTIF 414
           +  F  +P   L   FLV+  IF
Sbjct: 331 EEVFAQLPGGVLGAFFLVMVVIF 353



 Score =  204 bits (519), Expect = 7e-57
 Identities = 94/216 (43%), Positives = 142/216 (65%), Gaps = 13/216 (6%)

Query: 399 MVPPLALIFLVLGTIFIGLATPTEGGAMGAVGALALAAMKKRLSFDMVRQATYSTAKLAA 458
           ++PPL LI  VLG+I  G ATPTE  A+GA+GA+ LA +K +L+F  +++  Y T ++++
Sbjct: 246 LIPPLILIAAVLGSILAGYATPTEAAALGALGAMVLATLKGKLNFTQLKEVAYGTTEISS 305

Query: 459 FVLFILIGARVFSLTFYGVNGHVWVEELMVSLPGGQMGFLIAVSVMVFLLAFFLDFFELA 518
            V  ILIGA +FSL F G  G + +EE+   LPGG +G    V V++F L F LDF E+ 
Sbjct: 306 MVFMILIGASLFSLVFRGFGGEILIEEVFAQLPGGVLGAFFLVMVVIFFLGFILDFIEIT 365

Query: 519 FIVIPLLAPAADRLGIDLVWFGIILAVNMQTSFMHPPFGFSLFFLRSVAPKLPYIDRVTK 578
           F+V+P++ P    +G+D +W G+++A+N+QTSF+ PPFGF+LF+LR V P          
Sbjct: 366 FVVVPIVGPVLLAMGLDPIWLGVMIALNLQTSFLTPPFGFALFYLRGVTP---------- 415

Query: 579 KETAPVLTSQIYWGAVPFVVIQLVMVALVIAFPQMV 614
              A V TS IY G +PF++IQ+ ++A+   FP ++
Sbjct: 416 ---ASVATSTIYKGVLPFILIQIFLLAIAYVFPGLI 448