Pairwise Alignments

Query, 508 a.a., Long-chain-fatty-acid--CoA ligase from Azospirillum sp. SherDot2

Subject, 549 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  166 bits (421), Expect = 2e-45
 Identities = 146/532 (27%), Positives = 241/532 (45%), Gaps = 70/532 (13%)

Query: 10  AAATPGRPFLLFGDRSI--TYGAMAALVDDAVKRLTAQGVTAGSTVAMMVGNRPGFLVAW 67
           A  TP + ++++ DR++  T+  +   VDD  K L A GV  G+ V +   N P +L   
Sbjct: 16  AEETPDKEYIVYSDRNLRFTWSQLNQRVDDMAKGLIAVGVERGTHVGIWAANVPDWLTLL 75

Query: 68  FALSELGAITVPLNTALVGEGLRYLLEQSEASLLIA-----EEEFLSALPAAAPALLPMD 122
           +A +++GA+ V +NT      L YL + S+   L       + +F+       P L   +
Sbjct: 76  YACAKIGAVYVTVNTNYKQAELEYLCQNSDMHTLCIVNGEKDSDFVQMTYTMLPELKTCE 135

Query: 123 -GRFETAAGP--------GRAPRRRLALPGGTANAIL----------------------- 150
            G  ++   P        G+   R +     TA  +L                       
Sbjct: 136 RGHLKSERFPYMKNVIYVGQEKHRGMY---NTAEILLLGNNVEDDRLTELKSKVDCHDVV 192

Query: 151 ---YTSGTTGLPKGAVIPNACYELA------GEHMAAALELTEEDRILLFLPLFHANPQM 201
              YTSGTTG PKG ++ +  Y +A      GEHM    + T +D++   +PLFH    +
Sbjct: 193 NMQYTSGTTGFPKGVMLTH--YNIANNGFLTGEHM----KFTADDKLCCCVPLFHCFGVV 246

Query: 202 YGVMSCLRAGAALALLPRFSASRLLEDARRYGATGFTYVGTV-LSILAKRLTGPERGHSL 260
              M+CL  G    ++ RF    +L    +   T    V T+ ++ L   +        L
Sbjct: 247 LATMNCLTHGCTQVMVERFDPLVVLASIHKERCTALYGVPTMFIAELHHPMFDLFDMSCL 306

Query: 261 RWAVGGGA--PPGVWREIEEQLGVAVRELYGMTETGGWVS---MNTARAAKFGSVGAPRP 315
           R  +  G+  P  + +++EE++ + V  +YG+TE    ++   ++ +   +  +VG    
Sbjct: 307 RTGIMAGSLCPVELMKQVEEKMYMKVTSVYGLTEAAPGMTATRIDDSFDVRCNTVGRDFE 366

Query: 316 DTELCVVDADD-TPLPPGAKGEIVVRPRRPGLMFDGYWKKPEATVAAT-RNLWLHTGDRG 373
            TE+ V+D +     P G +GE+  R         GY+K PEAT     ++ +LH+GD G
Sbjct: 367 FTEVRVIDPETGEECPVGVQGEMCNRGYNT---MKGYYKNPEATAEVIDKDNFLHSGDLG 423

Query: 374 MIDADGFLHFDGRMKELIRRAGEMIAPVEIETALLKHPAVQDCAVVGVADDILGEEIKAV 433
           + D DG     GR+K++I R GE I P EIE  L K   V+D  V G+     GE + A 
Sbjct: 424 IKDEDGNYRITGRIKDMIIRGGENIYPREIEEFLYKLDGVKDVQVAGIPSKKYGEAVGAF 483

Query: 434 IVPRPGFD--PRDLPAFLTGRIPAFMIPRFVEMRTEIPKTATQKVQRHLLQD 483
           I+ + G +    D+  F   +I  + IP++V    E P T + K+Q+  L+D
Sbjct: 484 IILQEGVEMHESDVRDFCKNKISRYKIPKYVFFVKEFPMTGSGKIQKFRLKD 535