Pairwise Alignments

Query, 414 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

 Score =  170 bits (430), Expect = 8e-47
 Identities = 106/278 (38%), Positives = 153/278 (55%), Gaps = 11/278 (3%)

Query: 4   LARVSTLLLSLTVLTVLVAVLLTPL-PALAKRSVKKTSGPVAAEILMDAGSGKVIQGRNA 62
           LA+ + LLLSL +     AV + P  P LA +S           +LMDA SG V+   N 
Sbjct: 6   LAKRTCLLLSLIITPAAWAVEMVPASPQLAAKSW----------VLMDAASGNVLVESNG 55

Query: 63  DTLTYPASLTKMMTLMLTFEALERGSLRLDQSLVVSQHAASMPPSRLWLAPGSTITVEQA 122
           D    PASLTK+MT  +    + RG +  +  + VS++A     SR+++  GS +TV   
Sbjct: 56  DQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDL 115

Query: 123 ILALVTRSANDVAVVLGEALGGSETAFAARMTARAHALGMRRTVFRNASGLPDRLQRTTA 182
           +  ++ +S ND +V L E + GSE AFA  M      LGM  + F N +GLP+    ++A
Sbjct: 116 LHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSA 175

Query: 183 RDMAILSRALIRGHARHYAYFQRRSFDWQGDTVYGHNRLMARYPGMDGIKTGYIAASGFN 242
            DMAIL+RA+IR    HYA + ++ F W        N L+ R   +DG+KTG+   +G+ 
Sbjct: 176 HDMAILARAIIRVDPVHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYC 235

Query: 243 LAASAVRDGRRLIAVVMGGHSANSRDDRVADLLDAGFK 280
           + +SAVRDG+RLIAVV G +S  +R      LL  GF+
Sbjct: 236 MVSSAVRDGQRLIAVVFGTNSEQARAAETQKLLTYGFR 273