Pairwise Alignments

Query, 477 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 5/200 (2%)

Query: 14  LHAAGRFAEAETLYARVLEAEPGYPDALHLSGILLGQIGRLEEGLVRIAEAVARRPDSAE 73
           L   G + +A  +Y + L  +    +A +  GI L  + R  E +     +++    +++
Sbjct: 103 LSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAIECFDRSISINAKNSD 162

Query: 74  YLLNYGNLLRAAGRTGAAMDAYRRAHALGAPQAAEPLSGLLLEHGTRCLDGRDPTAAEAA 133
              N G      G+   ++D+Y +A  +      E +   LL  G   L  ++  +A   
Sbjct: 163 VWYNKGESQFKLGKYQESIDSYNKALLID-----EKMETALLGKGNSYLKLQNYESAIEC 217

Query: 134 FMEASRLRPGDLRIRTGLADARFDRQDWEAALAAYRAVLALSPSSRLVWYNSGVAACNAG 193
           F  A  + P         ADA  D +++E AL  Y   L ++PS+  V  N G+      
Sbjct: 218 FNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDETLEINPSNADVLINKGICFDKMK 277

Query: 194 RMAEAATAFRCAGTLAPDHL 213
             + A + F  A  L P ++
Sbjct: 278 NYSSAISNFDLAIQLDPKNV 297



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 15/77 (19%), Positives = 32/77 (41%)

Query: 156 FDRQDWEAALAAYRAVLALSPSSRLVWYNSGVAACNAGRMAEAATAFRCAGTLAPDHLDT 215
           +++ ++  +++ Y   L  +P S  +W N G +    G   E+   F  A  +  ++ + 
Sbjct: 36  YNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNKALLIDSENSEA 95

Query: 216 QEYLVATLFHCGRMAEA 232
              L   L   G   +A
Sbjct: 96  FNGLGTVLSKTGNYQKA 112