Pairwise Alignments

Query, 533 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 614 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  350 bits (897), Expect = e-100
 Identities = 226/541 (41%), Positives = 285/541 (52%), Gaps = 23/541 (4%)

Query: 11  AVALHNGGQPERAAALYRDVLAVEPAEPHSLHLLGLQMRRSGCEAEGIALMARSLLLAPT 70
           A A+   G    A    R    + P +P +   LG  +  +G        M  +  L PT
Sbjct: 76  ATAMLARGAKREALGHLRVACLLTPGDPDAHGRLGNLLHGAGDYVAATRHMTHAARLCPT 135

Query: 71  LAPALFNQARALQDSGRLDEAIAHFRRKLELDPNCGVTSIALGSEALARGRLDEAERILR 130
                   A AL        A+      L   P        L +  L+ GR D AE  L 
Sbjct: 136 DPDRQVLLAVALLSHCDHAGAVEVLTPVLARHPGHTDARTHLAAAWLSLGRPDLAEETLL 195

Query: 131 RAAVLEAGGAFASRLRRA-------LERVATARGIARDAADPSLPPGLVVRGAFRDSSGY 183
            A    +G    S  +         L R    R IA DA  P  P GL+VR  F   SGY
Sbjct: 196 AAGGAPSGDTPPSGGKPPTAQGDPILSRARLYRQIAADAQRPHTPEGLLVRAPFSVLSGY 255

Query: 184 AHKVRQFVRHLVDAGVRVRLVDLNHGDVDNLPDDQIDPLLHTLDR----PVRAKAVLSFT 239
               + FVR L++ G  +RL  L  G+    P    DP+L    R    PVRA+  LS  
Sbjct: 256 GDFAQHFVRSLMECGTTLRLAGLM-GEESWRPAFT-DPILQAAARRLGDPVRARLALSVL 313

Query: 240 TPLVVEAVPNLKTINYTVFEALDIPPLWATHSRRHDHVVVATDSSRQAWLNAGHPAGRVH 299
           TP +VE VP L T+NYT+FE   IP  WA  +R H+ VVV TDSSR AW+ AGHP  R+ 
Sbjct: 314 TPPLVEPVPGLPTVNYTMFEGPRIPDSWAVCNRAHEMVVVPTDSSRLAWIAAGHPEDRIR 373

Query: 300 VCPEGVEPLEPGRVA-PATLRGLNGRRLADYPVRILNISDLNSRKNLEGLLRVWLRTTRA 358
           VCP G+ P      A P  + G  GR + DY VR+LNISD  +RKNL GLLRVWLR TRA
Sbjct: 374 VCPPGIAPHPADAAAQPLPIVGPGGRSVMDYRVRVLNISDFVARKNLAGLLRVWLRGTRA 433

Query: 359 EDGAALLLKAGKGGGA-SDSIRDLLVRLTAETGRTLEQAAPLFLIEGMLSDAEMMSLHAT 417
           +D A L+LK GKGG +    +R L+      TGR L++AAP+ L+     DA +  L+A 
Sbjct: 434 DDDAILILKVGKGGSSLMGEMRRLVEEGMRATGRRLDEAAPVALLTDRYDDAGIAGLYAV 493

Query: 418 ATHYWSMSHGEGWDLPMAQAGAMGLTLLAPDHSAYRAYLDSRVAHMIPSRVTPALDGY-- 475
           ATHY S+SHGEGWDLP+ +AG +G  L+AP HSAY AYL+ RVAH+IP    PAL  Y  
Sbjct: 494 ATHYLSLSHGEGWDLPITRAGCLGAGLIAPRHSAYTAYLNDRVAHLIPCTTGPALMPYSS 553

Query: 476 ------RGRDWWTPDEDAAARLLRAVIADPDGTRLSAREHLLEHFSWRSAAHRLIDLLRG 529
                  G DWW PDEDAAA +L  VI DP+G R  A  HL+++F+W +AA RL+D L G
Sbjct: 554 AYYQPFHGLDWWHPDEDAAADILSRVIRDPEGGRRDAARHLMDNFTWDAAARRLLDALDG 613

Query: 530 L 530
           +
Sbjct: 614 V 614



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 53/129 (41%)

Query: 7   ILTEAVALHNGGQPERAAALYRDVLAVEPAEPHSLHLLGLQMRRSGCEAEGIALMARSLL 66
           +   A+ L+  G+ + A +L   VL  +P +  +L L G+ + +S    E   ++ R + 
Sbjct: 4   VTDRAIELYKAGRRDEALSLVEQVLREDPVDRDALSLAGVILYQSDRLDEAERMLHRLIA 63

Query: 67  LAPTLAPALFNQARALQDSGRLDEAIAHFRRKLELDPNCGVTSIALGSEALARGRLDEAE 126
             P  A    N A A+   G   EA+ H R    L P        LG+     G    A 
Sbjct: 64  GHPLFAQGRINLATAMLARGAKREALGHLRVACLLTPGDPDAHGRLGNLLHGAGDYVAAT 123

Query: 127 RILRRAAVL 135
           R +  AA L
Sbjct: 124 RHMTHAARL 132



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 5/122 (4%)

Query: 46  LQMRRSGCEAEGIALMARSLLLAPTLAPALFNQARALQDSGRLDEAIAHFRRKLELDPNC 105
           +++ ++G   E ++L+ + L   P    AL      L  S RLDEA     R +   P  
Sbjct: 9   IELYKAGRRDEALSLVEQVLREDPVDRDALSLAGVILYQSDRLDEAERMLHRLIAGHPLF 68

Query: 106 GVTSIALGSEALARGRLDEAERILRRAAVL-----EAGGAFASRLRRALERVATARGIAR 160
               I L +  LARG   EA   LR A +L     +A G   + L  A + VA  R +  
Sbjct: 69  AQGRINLATAMLARGAKREALGHLRVACLLTPGDPDAHGRLGNLLHGAGDYVAATRHMTH 128

Query: 161 DA 162
            A
Sbjct: 129 AA 130