Pairwise Alignments

Query, 389 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 392 a.a., amino acid ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  284 bits (726), Expect = 3e-81
 Identities = 170/366 (46%), Positives = 228/366 (62%), Gaps = 14/366 (3%)

Query: 28  ILALVLLGGFLLGSNTLANMERFGITPGFAFLGRPAGFEIGEALLDYRPQDSYALALLVG 87
           ++A+V LG +L   NT  N++  GIT GF FL R AGF I + L+ Y  QDSYA   ++G
Sbjct: 28  VVAVVGLGWYLF-HNTQTNLQHRGITSGFDFLERSAGFGIAQHLISYTEQDSYARVFVIG 86

Query: 88  LLNTVKVAVAGGLIATVLGVLLGVARLSGNALLSGLVQGYVELIRSTPLLLQLFFWS-AT 146
           LLNT+ V   G ++AT+LG ++GVARLS N ++S L   YVE  R+ P LLQ+ FW  A 
Sbjct: 87  LLNTLLVTFIGIILATLLGFIIGVARLSPNWMISKLATVYVETFRNIPPLLQILFWYFAV 146

Query: 147 FQALPSPRQALNPLPGVFLCNRGIQLPAFADGRAGGWMLAAVALALALALAGTVLRRRLG 206
           F  LP PR ++N     F+ NRG+ +P  A    G W      ++LALA+   VL  RL 
Sbjct: 147 FLTLPGPRGSINLNDTFFISNRGLNMPG-ASMAEGFWPFV---VSLALAIVAIVLMVRLA 202

Query: 207 -RRDAVSGMSVAAAACGL------PVALLLASGAPLQVEVPELAGFNFSGGTTVSPEFSA 259
            RR   +G        GL      P   +L  G+PL  ++P+L GFNF GG  + PE  A
Sbjct: 203 NRRFEATGEPFHKFWVGLFLFFGIPALGVLLFGSPLHWDMPQLKGFNFVGGWVLIPELLA 262

Query: 260 LLVGLVVNAAAMIAEIVRSGIQAVPGGQWEAARALGLPRRRIMRLVVLPQAMRVIVPLLT 319
           L + L +  AA IAEIVRSGI++V  GQ EAAR+LGL     +R V++PQA+RVI+P LT
Sbjct: 263 LTLALTIYTAAFIAEIVRSGIRSVSYGQTEAARSLGLREGPTLRKVIIPQALRVIIPPLT 322

Query: 320 SSYLNLTKNSSLAVAIGFPDLVSVI-NTSANQTGQVLETMAIMMGAYLTVNLAVSAAMNL 378
           S YLNL KNSSLA  IG+P++VS+   T  NQTGQ +E +AI M  YL +++++S  MN 
Sbjct: 323 SQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNW 382

Query: 379 YNRRLA 384
           YN+R+A
Sbjct: 383 YNKRIA 388