Pairwise Alignments

Query, 356 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Azospirillum sp. SherDot2

Subject, 343 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  308 bits (790), Expect = 1e-88
 Identities = 159/333 (47%), Positives = 213/333 (63%), Gaps = 3/333 (0%)

Query: 27  LSLAIGLALTGAAKAGPTLDAIRARGSIKVGVGTQ-PGFFAPDSNGRWQGFFVDFGRALS 85
           +S A  L ++G A+AG TLDA++ +G ++ GV    PGF  PD++G+  G   D  RA++
Sbjct: 11  VSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGIDADVCRAVA 70

Query: 86  IAVFNDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHF-GPVVFYDGQ 144
            AVF D  KV+F   + ++R  ALQSGE DIL    T T +R   +G  F G + +YDG 
Sbjct: 71  AAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFPGFITYYDGI 130

Query: 145 GLLVPKKLGVTKGKDLNGATVCVQTGTTGELNITDFFWQNKIAFKPVVIEETAENQKAFA 204
           G LV  KLGV   K+L+GAT+C+Q GTT ELN++D+F  N + + P+  + + E+ K+  
Sbjct: 131 GFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFDTSDESAKSLE 190

Query: 205 SGRCDVLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYA 264
           SGRCDVLT D S L   R++L  P DYV+LPE ISKEPL P +R GDD+WL IV W  YA
Sbjct: 191 SGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEWLAIVRWVGYA 250

Query: 265 TIQAEELGITQANVDSFLTSA-DPTVRRFLGVDPSLGEAAKLDPKFAYTIVKNVGNYGEI 323
            + AEE GIT  NV++   S  +P V R LG D   G+  K+   +   IVK VGNYGE+
Sbjct: 251 MLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGEYGKDLKVKKDWVVQIVKQVGNYGEV 310

Query: 324 FERNVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356
           FERN+G +T + +DRG N LW  GG+ YAPP R
Sbjct: 311 FERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343