Pairwise Alignments

Query, 612 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 304 a.a., ABC transporter permease subunit from Pseudomonas sp. SVBP6

 Score =  207 bits (527), Expect = 5e-58
 Identities = 112/298 (37%), Positives = 178/298 (59%), Gaps = 15/298 (5%)

Query: 7   GPWLDYTINGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKL---- 62
           G +L   +NGL +G++Y L+A+G  +++G+  +INFAHG VYM+ AY+  + +  L    
Sbjct: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFG 62

Query: 63  --NLPLPV--TFIVVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLL 118
             + PL +  T I      G+ G  IER+  +PLRN+ R+APL++ IG+S++L   AQ+ 
Sbjct: 63  IESFPLLMLGTLIFTVVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQIS 122

Query: 119 FSPDPRALPTQLP-TWRIAIGGGSIGA----LDLLIAGVGIGSAALLYGFLRFTKLGWAV 173
                + +PT L   WR+ +G G +      + +L+A   +G AAL Y  ++FTKLG   
Sbjct: 123 QGARQQGVPTLLEGAWRVEVGTGFVQLTYTKIFILVAAF-VGMAALTY-IIKFTKLGRMC 180

Query: 174 RATALDRDAAQQCGVDVDKVNRTVFAIASALGGVSGLLVGMYYNTIDPNMGFQAGLKGIV 233
           RAT  DR  A   G++ D+V   VF I + +  ++G+L+ M Y T D   GF  G+K   
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFT 240

Query: 234 AQLIGGVGNVPGAIAGSLLLGLIESYGIALFGTSYRNLFAFVALILILVLRPNGLFAR 291
           A ++GG+G++PGA+ G ++LG+ ES    L  + Y+++F+F  L+LIL+ RP GL  R
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVLILIFRPQGLLGR 298



 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 29/292 (9%)

Query: 340 TLGNAWLYALLALSLTLVAGTVGQVSLGHAGLLAIGAYASSL-LALDA-----GVPVLLA 393
           TLG+  +Y L+A+  T+V G +G ++  H  +  I AY +++ LAL A       P+L+ 
Sbjct: 14  TLGS--VYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPLLML 71

Query: 394 VPL--AGLVAAALGTALVYPAFRLRGHYVSIATLAVGEIVTLVILNWESLTRGPIGVTGI 451
             L    +V    G  +   A++   +   +A L     ++L++ N+  +++G     G+
Sbjct: 72  GTLIFTVVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGA-RQQGV 130

Query: 452 PPLSVAGKPLVSG----QWVY---WVPLAVLLAFAALQSRLLSSHLGRTLRAIREDDVAA 504
           P L      +  G    Q  Y   ++ +A  +  AAL   +  + LGR  RA ++D   A
Sbjct: 131 PTLLEGAWRVEVGTGFVQLTYTKIFILVAAFVGMAALTYIIKFTKLGRMCRATQQDRKMA 190

Query: 505 RSYGVDLNRYKGLAFAVAGFIAGVGGALMAHFYSYINHETFPAPVSML----ALTMVILG 560
              G++ +R     F +   +A + G L+      +N+ TF      +    A T  +LG
Sbjct: 191 SILGINTDRVISYVFVIGAVMAALAGVLIT-----MNYGTFDFYAGFIIGIKAFTAAVLG 245

Query: 561 GLGNVAGAVLGAAVLVGLPELFRAA--AEYRMLIYGVVLLLLIRFRPQGLLG 610
           G+G++ GA+LG  +L     LF     ++Y+ +    +L+L++ FRPQGLLG
Sbjct: 246 GIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVLILIFRPQGLLG 297