Pairwise Alignments

Query, 228 a.a., IS110 family transposase ISHne3 from Azospirillum sp. SherDot2

Subject, 310 a.a., IS110 family transposase from Pseudomonas fluorescens SBW25

 Score =  127 bits (318), Expect = 3e-34
 Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 4/226 (1%)

Query: 3   DPARVRYFARATGQRAKNDTIDAALIAEFTASQVALATTPPDPTREELADLVKARRLLVD 62
           +P R + FARA GQ+AK D IDA L+A+F A   +  +      +++L  LV+ R   V 
Sbjct: 77  NPCRAKSFARAMGQQAKTDPIDARLLAQFAAVIKSPDSRVTSAEQDDLRALVQQREHFVQ 136

Query: 63  KRVD-LRHASAGAPAIAQAVLEEAVEGLTAAIATLEAEIHSRVEAQPELADRVAALQTAP 121
           +R D  R     +  + +  L+  ++ L   +  LE+ I    E       +VA L +  
Sbjct: 137 QRDDDKRRLKTTSSDVVKPALQSHIDYLQKVLKELESLIRQSAERLDR--KKVALLCSVK 194

Query: 122 GVGPVVATTLAILLPELGKTTGERMSALVGVTPFDYDSGKSRGKRHIAGGRAAVRHALYI 181
           G+G V A +L   LPELG+    +++AL G  P++ DSGK +GKRHI+GGR A R +LY+
Sbjct: 195 GIGLVTAASLMSYLPELGEVGRHQIAALSGTAPYNDDSGKHKGKRHISGGRFAARRSLYM 254

Query: 182 AAEVAATHSKGAIVDVHLQLKWRGKPSRVTLTACMRKLIVRLNIML 227
           A   +    +      +  L+ +GK ++V L ACMR L+VRLN M+
Sbjct: 255 AC-WSVIRFQPEFAARYKALREKGKCAKVALIACMRVLLVRLNAMI 299