Pairwise Alignments

Query, 228 a.a., IS110 family transposase ISHne3 from Azospirillum sp. SherDot2

Subject, 326 a.a., IS110-like element IS621 family transposase from Escherichia coli ECRC62

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 10/225 (4%)

Query: 1   MFDPARVRYFARATGQRAKNDTIDAALIAEFTASQVALATTPPDPTREELADLVKARRLL 60
           + +PA  + FA++ G R K DT+DA ++AEF   +   A   P P    L  LV   + L
Sbjct: 82  VINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQAL 141

Query: 61  VDKRVDLRHASAGAPAIAQAVLEEAVEGLTAAIATLEAEIHSRVEAQPELADRVAALQTA 120
            D      + +  A  + +  ++  +  L A +  LE +I    +  P++  R   L++ 
Sbjct: 142 TDMHTQELNRTETAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESI 201

Query: 121 PGVGPVVATTLAILLPELGK----TTGERMSALVGVTPFDYDSGKS-RG-KRHIAGGRAA 174
           PG+G     T A+LL  +G         + +A  G+TP  Y+SG S RG  R    G  +
Sbjct: 202 PGIG---EKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKAGHVS 258

Query: 175 VRHALYIAAEVAATHSKGAIVDVHLQLKWRGKPSRVTLTACMRKL 219
           +R ALY+ A VA + ++        +L   GK  +V L A MRKL
Sbjct: 259 LRRALYMPAMVATSKTEWGRA-FRDRLAANGKKGKVILGAMMRKL 302